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CAZyme Information: HpaG813659:RNA-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Hyaloperonospora arabidopsidis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Hyaloperonospora; Hyaloperonospora arabidopsidis | |||||||||||
| CAZyme ID | HpaG813659:RNA-p1 | |||||||||||
| CAZy Family | GT71 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 2.4.1.34:28 |
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CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GT48 | 849 | 1604 | 3.1e-271 | 0.9756427604871448 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 396784 | Glucan_synthase | 0.0 | 850 | 1533 | 3 | 701 | 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). |
| 405046 | FKS1_dom1 | 7.87e-31 | 155 | 246 | 8 | 106 | 1,3-beta-glucan synthase subunit FKS1, domain-1. The FKS1_dom1 domain is likely to be the 'Class I' region just N-terminal to the first set of transmembrane helices that is involved in 1,3-beta-glucan synthesis itself. This family is found on proteins with family Glucan_synthase, pfam02364. |
| 395036 | Sugar_tr | 2.24e-26 | 1786 | 2155 | 44 | 429 | Sugar (and other) transporter. |
| 340916 | MFS_GLUT6_8_Class3_like | 1.11e-23 | 1746 | 2131 | 2 | 393 | Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major Facilitator Superfamily. This subfamily is composed of glucose transporter type 6 (GLUT6), GLUT8, plant early dehydration-induced gene ERD6-like proteins, and similar insect proteins including facilitated trehalose transporter Tret1-1. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). Insect Tret1-1 is a low-capacity facilitative transporter for trehalose that mediates the transport of trehalose synthesized in the fat body and the incorporation of trehalose into other tissues that require a carbon source. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. |
| 273317 | SP | 2.49e-22 | 1766 | 2160 | 49 | 467 | MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083) [Transport and binding proteins, Carbohydrates, organic alcohols, and acids] |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 0.0 | 8 | 2225 | 10 | 2224 | |
| 0.0 | 12 | 2225 | 11 | 2222 | |
| 0.0 | 12 | 2226 | 12 | 2235 | |
| 0.0 | 1 | 2222 | 1 | 2236 | |
| 0.0 | 10 | 2222 | 6 | 2241 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5.30e-226 | 60 | 1739 | 230 | 1934 | Callose synthase 1 OS=Arabidopsis thaliana OX=3702 GN=CALS1 PE=1 SV=2 |
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| 8.63e-226 | 69 | 1739 | 258 | 1918 | Callose synthase 7 OS=Arabidopsis thaliana OX=3702 GN=CALS7 PE=3 SV=3 |
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| 2.00e-223 | 60 | 1739 | 234 | 1939 | Callose synthase 3 OS=Arabidopsis thaliana OX=3702 GN=CALS3 PE=3 SV=3 |
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| 1.87e-222 | 75 | 1739 | 259 | 1878 | Callose synthase 9 OS=Arabidopsis thaliana OX=3702 GN=CALS9 PE=2 SV=2 |
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| 3.45e-222 | 69 | 1739 | 265 | 1892 | Callose synthase 10 OS=Arabidopsis thaliana OX=3702 GN=CALS10 PE=2 SV=5 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 1.000064 | 0.000000 |
TMHMM Annotations download full data without filtering help
| Start | End |
|---|---|
| 280 | 302 |
| 376 | 398 |
| 410 | 432 |
| 467 | 486 |
| 507 | 529 |
| 1293 | 1315 |
| 1322 | 1341 |
| 1356 | 1375 |
| 1382 | 1404 |
| 1449 | 1468 |
| 1489 | 1511 |
| 1593 | 1615 |
| 1628 | 1650 |
| 1654 | 1671 |
| 1678 | 1696 |
| 1700 | 1722 |
| 1742 | 1764 |
| 1792 | 1814 |
| 1819 | 1841 |
| 1846 | 1868 |
| 1880 | 1897 |
| 1907 | 1929 |
| 1985 | 2006 |
| 2016 | 2038 |
| 2045 | 2067 |
| 2077 | 2099 |
| 2111 | 2133 |
| 2143 | 2165 |