CAZyme Information: HpaG813434:RNA-p1

Basic Information

• Species: Hyaloperonospora arabidopsidis
• Lineage: Oomycota; NA; ; Peronosporaceae; Hyaloperonospora; Hyaloperonospora arabidopsidis
• CAZyme ID: HpaG813434:RNA-p1
• CAZy Family: GT71
• CAZyme Description: unspecified product

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1019		115515.27	7.3181

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_HarabidopsidisEmoy2	14267	559515	285	13982

• Gene Location: location=HaraEmoy2_SC0275:36880-40456(-)

Full Sequence      

MMMEQSAGPPSDAYAMYTTPSSMGVQQPSEKELVHPIGGGIGGAPDDLLGRAPTSSDQTD
NLDDNVITVHGYMHKQGKRTIKGPMHKSWKRRYFALEKAKIFYFHSHLECRQYFTTRNTD
LVVGAIELKDALQLRPCARLDLPHKGFEVHTKRRVWVLCPETEEEYRLWFEGVEEAIVSC
GSGNIIERKLPNVRKYYMKGITTYRILYFLFLLLSLGEIFGLVFWFVVGIQPCDLSNRTL
ACEDVYINTPDELDCLADPMSGWFTPPDWYLTLAGVDDVVCFHNPSIAQWVSFFALIVAE
LVSIVLGALYYLGMWKPVRRGAHYFDEFDPKVPDDLWPKIDVLLCHYSEPAEETIDTLMA
CMNLQYPPHLLQIYVLDDGYCRTKWTKGNSVPAIELNKVILEKSGDLRQEVAQFMYDRVC
DPNEDMEVYAWRKLHSSANLPSASRPRVVNRADCAVGSFRDDYRYPGLPHVTFVGRVKPE
EHYSKAGNINNCLYNEGANGRYMLLLDTDTQPHPKFILATLPFFFDDEDRQSRNKYSCSC
SGCQNVAKMCCASCKIAGVPEERISYCSKECFENATHVQSDLHRRQVNGTLSDTRATKKE
LRCVNCDSKLGKSGVCRKCNTNNNSNADMSILHSYSDDVRDNAVGFVQTPQYFRDCVQLQ
IGDPLGHRNSAFYDATQTGQDGYDCASFAGTNALIRREALDSIGGIQYGTLTEDCYTGER
LVSMGWKALYFRKDFEGEAHERVRLAEGSIPDSVAAAMAQRKRWAKGNFQTALMKKNKNV
ADPEWKRPHVDIPKYRKPNNFMRRVFYLNSTLYPIESISVILLYYVTLYFLYTGYAPIFV
NGLRVLVALVPKLVVQGVLTALSTRGVENNDVVRSQETRFVYAFTNFTAMLGAIVWKITG
RKSKWLNRHDATRGSLAELPNVLVFSGAVFGIVWAMVRYIVAYYNRVYSHGDSMLCAAVL
MGFYIAYNLGPSVRMSIQEYFGWSYQSLMDQGNFMGSISIAVGLMFIALWVHVEKPVIG

Enzyme Prediction     

EC	2.4.1.12:3

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GT2	640	837	1.2e-16	0.8223350253807107

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
133043	CESA_CelA_like	1.05e-37	338	772	1	234	CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
236918	bcsA	1.69e-18	640	846	366	554	cellulose synthase catalytic subunit; Provisional
133057	CESA_NdvC_like	6.91e-15	641	770	111	230	NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
404513	Glyco_trans_2_3	1.88e-13	639	832	23	193	Glycosyl transferase family group 2. Members of this family of prokaryotic proteins include putative glucosyltransferases, which are involved in bacterial capsule biosynthesis.
224136	BcsA	2.65e-12	640	851	164	356	Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AXF53808.1|GT2	0.0	4	1019	5	1016
UOI87916.1|GT2	0.0	7	1019	9	1015
UIZ24308.1|GT2	0.0	4	1019	5	1013
ABP96906.1|GT2	0.0	6	1019	9	1013
ABP96902.1|GT2|2.4.1.12	0.0	6	1019	9	1016

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5EJ1_A	3.72e-15	639	810	252	401	Chain A, Putative cellulose synthase [Cereibacter sphaeroides 2.4.1]
4HG6_A	4.03e-15	639	810	264	413	Chain A, Cellulose Synthase Subunit A [Cereibacter sphaeroides]
4P00_A	4.03e-15	639	810	265	414	Chain A, Cellulose Synthase A subunit [Cereibacter sphaeroides 2.4.1],4P02_A Chain A, Cellulose Synthase subunit A [Cereibacter sphaeroides 2.4.1],5EIY_A Chain A, Putative cellulose synthase [Cereibacter sphaeroides 2.4.1],5EJZ_A Chain A, Putative cellulose synthase [Cereibacter sphaeroides 2.4.1]
7LBY_A	5.87e-13	639	846	378	567	Chain A, Cellulose synthase catalytic subunit [UDP-forming] [Escherichia coli K-12]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q9U720|DCSA_DICDI	9.40e-23	469	767	584	760	Cellulose synthase catalytic subunit A [UDP-forming] OS=Dictyostelium discoideum OX=44689 GN=dcsA PE=1 SV=1
sp|O82859|BCSA2_KOMSB	3.42e-14	639	770	256	381	Cellulose synthase catalytic subunit [UDP-forming] OS=Komagataeibacter sucrofermentans (strain ATCC 700178 / DSM 15973 / CECT 7291 / JCM 9730 / LMG 18788 / BPR 2001) OX=1307942 GN=bcsA PE=3 SV=1
sp|P19449|BCSA1_KOMXY	3.42e-14	639	770	254	379	Cellulose synthase catalytic subunit [UDP-forming] OS=Komagataeibacter xylinus OX=28448 GN=bcsA PE=1 SV=1
sp|Q9WX61|BCSA3_KOMXY	2.31e-13	639	770	254	379	Cellulose synthase 1 catalytic subunit [UDP-forming] OS=Komagataeibacter xylinus OX=28448 GN=bcsAI PE=3 SV=1
sp|Q93IN2|BCSA_SALTY	2.28e-12	639	854	378	571	Cellulose synthase catalytic subunit [UDP-forming] OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bcsA PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
1.000032	0.000000

TMHMM  Annotations     

Start	End
206	228
290	312
805	827
837	859
880	899
919	941
954	976
991	1013