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CAZyme Information: HpaG812792:RNA-p1

You are here: Home > Sequence: HpaG812792:RNA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Hyaloperonospora arabidopsidis
Lineage Oomycota; NA; ; Peronosporaceae; Hyaloperonospora; Hyaloperonospora arabidopsidis
CAZyme ID HpaG812792:RNA-p1
CAZy Family GT60
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
244 27521.38 8.2029
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_HarabidopsidisEmoy2 14267 559515 285 13982
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 2.4.1.-:14

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT50 129 244 8.7e-28 0.41603053435114506

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
178434 PLN02841 1.93e-62 3 244 6 263
GPI mannosyltransferase
252941 Mannosyl_trans 3.77e-13 129 244 1 105
Mannosyltransferase (PIG-M). PIG-M has a DXD motif. The DXD motif is found in many glycosyltransferases that utilize nucleotide sugars. It is thought that the motif is involved in the binding of a manganese ion that is required for association of the enzymes with nucleotide sugar substrates.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.70e-63 14 243 12 240
3.30e-62 10 243 14 245
4.46e-59 10 243 14 245
1.63e-58 11 241 22 254
1.63e-58 11 241 22 254

PDB Hits      help

HpaG812792:RNA-p1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.62e-59 7 243 25 263
GPI mannosyltransferase 1 OS=Dictyostelium discoideum OX=44689 GN=pigm PE=3 SV=1
2.89e-59 11 241 22 254
GPI mannosyltransferase 1 OS=Homo sapiens OX=9606 GN=PIGM PE=1 SV=1
2.89e-59 11 241 22 254
GPI mannosyltransferase 1 OS=Pongo abelii OX=9601 GN=PIGM PE=2 SV=1
2.25e-58 11 241 22 254
GPI mannosyltransferase 1 OS=Macaca fascicularis OX=9541 GN=PIGM PE=2 SV=1
1.13e-57 10 241 17 252
GPI mannosyltransferase 1 OS=Xenopus tropicalis OX=8364 GN=pigm PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.999996 0.000003

TMHMM  Annotations      download full data without filtering help

Start End
7 26
77 99
137 151
161 183
215 237