CAZyme Information: HpaG812029:RNA-p1

Basic Information

• Species: Hyaloperonospora arabidopsidis
• Lineage: Oomycota; NA; ; Peronosporaceae; Hyaloperonospora; Hyaloperonospora arabidopsidis
• CAZyme ID: HpaG812029:RNA-p1
• CAZy Family: GT57
• CAZyme Description: unspecified product

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
505		57288.80	6.3774

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_HarabidopsidisEmoy2	14267	559515	285	13982

• Gene Location: location=HaraEmoy2_SC0180:88888-90405(-)

Full Sequence      

MESVMGIVNSNRTVNLDPSVQHIPLDPAKAHMRPPPAQICAASDIFVGISVFRDGFRCGK
TIFTGLKRAKYPNHLFFGIVDQVNDGDERCVDEYCKMAEAEWPDKGECPYRDHIRVDLHS
AFESRGPTLARHYQQKLIEREEFCLQVDGHSIFTNLWDENLLAEWKRVDNEMAILSTYIH
DLHDFIKENGDNAFSSSLPHLCSTMRGSNGMVRTTGASMISKSKFPQLQALWGAGMSFNK
CHAERRVPVDSHTLWLFDGEEFLRAARLWTSGYDMYSPSDLGSVVFHNYSKVPARFEHIK
VDRQLRLREKEMALNRFNLLVGKPIKGRVDTFELDKYGFGSVRSFKSYLDFCGVTFQEGV
NDTESCEQLHWVPYENETEVEALVGNGWKLGEMNRGVTAESVLLTKEHEVVDEDPNAEAA
RHAADAHVRDGADIGEDETIDGVKTRLRQKVTDNRVAKSDPAAWVWPFLVVVMASLFLRF
SKDSVSRKIRLSLRASVPRPHSSIE

Enzyme Prediction     

No EC number prediction in HpaG812029:RNA-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GT60	44	357	8.5e-61	0.996969696969697

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
371506	GlcNAc	1.93e-42	44	356	1	349	Glycosyltransferase (GlcNAc). GlcNAc is an enzyme that carries out the first glycosylation step of hydroxylated Skp1, a ubiquitous eukaryotic protein, in the cytoplasm.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
UIZ22573.1|GT60	6.91e-244	1	505	28	503
QVE55543.1|GT60	3.06e-203	1	490	25	479
UIZ25301.1|GT60	9.45e-198	3	401	8	409
UIZ25379.1|GT60	3.27e-165	12	493	39	512
CCA18910.1|GT60	2.44e-39	49	374	91	412

PDB Hits     

HpaG812029:RNA-p1 has no PDB hit.

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q8T1C6|GNT1_DICDI	5.01e-19	43	291	4	251	[Skp1-protein]-hydroxyproline N-acetylglucosaminyltransferase OS=Dictyostelium discoideum OX=44689 GN=gnt1 PE=1 SV=2

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
1.000070	0.000000

TMHMM  Annotations     

Start	End
462	481