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CAZyme Information: HpaG811925:RNA-p1

You are here: Home > Sequence: HpaG811925:RNA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Hyaloperonospora arabidopsidis
Lineage Oomycota; NA; ; Peronosporaceae; Hyaloperonospora; Hyaloperonospora arabidopsidis
CAZyme ID HpaG811925:RNA-p1
CAZy Family GT48
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
287 30716.78 4.0401
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_HarabidopsidisEmoy2 14267 559515 285 13982
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in HpaG811925:RNA-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 2 236 5.6e-59 0.8693877551020408

CDD Domains      help

HpaG811925:RNA-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.29e-95 1 173 26 198
3.60e-93 1 173 26 198
3.60e-93 1 173 26 198
5.16e-67 1 173 28 204
1.46e-66 1 173 28 204

PDB Hits      help

HpaG811925:RNA-p1 has no PDB hit.

Swiss-Prot Hits      help

HpaG811925:RNA-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000033 0.000005

TMHMM  Annotations      help

There is no transmembrane helices in HpaG811925:RNA-p1.