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CAZyme Information: HpaG811466:RNA-p1

You are here: Home > Sequence: HpaG811466:RNA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Hyaloperonospora arabidopsidis
Lineage Oomycota; NA; ; Peronosporaceae; Hyaloperonospora; Hyaloperonospora arabidopsidis
CAZyme ID HpaG811466:RNA-p1
CAZy Family GT4
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1029 HaraEmoy2_SC0158|CGC1 116406.83 5.3706
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_HarabidopsidisEmoy2 14267 559515 285 13982
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.20:27 3.2.1.84:26

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH31 413 886 3.5e-143 0.9953161592505855

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
269889 GH31_GANC_GANAB_alpha 0.0 432 927 1 467
neutral alpha-glucosidase C, neutral alpha-glucosidase AB. This subgroup includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB). Initially distinguished on the basis of differences in electrophoretic mobility in starch gel, GANC and GANAB have been shown to have other differences, including those of substrate specificity. GANC and GANAB are key enzymes in glycogen metabolism that hydrolyze terminal, non-reducing 1,4-linked alpha-D-glucose residues from glycogen in the endoplasmic reticulum. The GANC/GANAB family includes the alpha-glucosidase II (ModA) from Dictyostelium discoideum as well as the alpha-glucosidase II (GLS2, or ROT2 - Reversal of TOR2 lethality protein 2) from Saccharomyces cerevisiae.
395838 Glyco_hydro_31 0.0 413 886 1 442
Glycosyl hydrolases family 31. Glycosyl hydrolases are key enzymes of carbohydrate metabolism. Family 31 comprises of enzymes that are, or similar to, alpha- galactosidases.
224418 YicI 8.51e-166 289 977 139 756
Alpha-glucosidase, glycosyl hydrolase family GH31 [Carbohydrate transport and metabolism].
269890 GH31_glucosidase_II_MalA 8.40e-133 432 786 1 333
Alpha-glucosidase II-like. Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities. Alpha-glucosidase II has been characterized in Bacillus thermoamyloliquefaciens where it forms a homohexamer. This subgroup also includes the MalA alpha-glucosidase from Sulfolobus solfataricus and the AglA alpha-glucosidase from Picrophilus torridus. MalA is part of the carbohydrate-metabolizing machinery that allows this organism to utilize carbohydrates, such as maltose, as the sole carbon and energy source.
215408 PLN02763 6.25e-101 418 924 164 632
hydrolase, hydrolyzing O-glycosyl compounds

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 13 1029 2 1019
0.0 23 1025 13 1006
4.19e-263 194 1018 17 853
3.46e-259 18 1021 10 941
3.90e-259 15 1018 7 963

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.29e-252 18 1020 18 940
Chain A, Neutral alpha-glucosidase AB [Mus musculus],7KRY_C Chain C, Neutral alpha-glucosidase AB [Mus musculus]
6.60e-252 32 1020 1 909
Murine endoplasmic reticulum alpha-glucosidase II with N-butyl-1-deoxynojirimycin [Mus musculus]
6.82e-252 32 1020 1 909
Murine endoplasmic reticulum alpha-glucosidase II with N-9'-methoxynonyl-1-deoxynojirimycin [Mus musculus]
7.35e-251 18 1020 18 962
Chain A, Alpha glucosidase 2 alpha neutral subunit [Mus musculus],7JTY_C Chain C, Alpha glucosidase 2 alpha neutral subunit [Mus musculus],7K9N_A Chain A, Alpha glucosidase 2 alpha neutral subunit [Mus musculus],7K9N_C Chain C, Alpha glucosidase 2 alpha neutral subunit [Mus musculus],7K9O_A Chain A, Alpha glucosidase 2 alpha neutral subunit [Mus musculus],7K9O_C Chain C, Alpha glucosidase 2 alpha neutral subunit [Mus musculus],7K9Q_A Chain A, Alpha glucosidase 2 alpha neutral subunit [Mus musculus],7K9Q_C Chain C, Alpha glucosidase 2 alpha neutral subunit [Mus musculus],7K9T_A Chain A, Alpha glucosidase 2 alpha neutral subunit [Mus musculus],7K9T_C Chain C, Alpha glucosidase 2 alpha neutral subunit [Mus musculus],7KAD_A Chain A, Isoform 2 of Neutral alpha-glucosidase AB [Mus musculus],7KAD_C Chain C, Isoform 2 of Neutral alpha-glucosidase AB [Mus musculus],7KB6_A Chain A, Isoform 2 of Neutral alpha-glucosidase AB [Mus musculus],7KB6_C Chain C, Isoform 2 of Neutral alpha-glucosidase AB [Mus musculus],7KB8_A Chain A, Isoform 2 of Neutral alpha-glucosidase AB [Mus musculus],7KB8_C Chain C, Isoform 2 of Neutral alpha-glucosidase AB [Mus musculus]
2.08e-250 32 1020 1 931
Murine endoplasmic reticulum alpha-glucosidase II with castanospermine [Mus musculus],5IEE_A Murine endoplasmic reticulum alpha-glucosidase II with 1-deoxynojirimycin [Mus musculus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.14e-260 18 1021 10 941
Neutral alpha-glucosidase AB OS=Dictyostelium discoideum OX=44689 GN=modA PE=3 SV=1
4.09e-255 12 1020 11 941
Neutral alpha-glucosidase AB OS=Sus scrofa OX=9823 GN=GANAB PE=1 SV=1
3.67e-253 12 1020 11 941
Neutral alpha-glucosidase AB OS=Mus musculus OX=10090 GN=Ganab PE=1 SV=1
3.67e-253 12 1020 11 941
Neutral alpha-glucosidase AB OS=Homo sapiens OX=9606 GN=GANAB PE=1 SV=3
1.46e-252 12 1020 11 941
Neutral alpha-glucosidase AB OS=Macaca fascicularis OX=9541 GN=GANAB PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.963309 0.036705

TMHMM  Annotations      help

There is no transmembrane helices in HpaG811466:RNA-p1.