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CAZyme Information: HpaG809702:RNA-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Hyaloperonospora arabidopsidis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Hyaloperonospora; Hyaloperonospora arabidopsidis | |||||||||||
| CAZyme ID | HpaG809702:RNA-p1 | |||||||||||
| CAZy Family | GT2 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH17 | 46 | 297 | 1.8e-22 | 0.9389067524115756 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 227625 | Scw11 | 2.84e-40 | 45 | 290 | 59 | 301 | Exo-beta-1,3-glucanase, GH17 family [Carbohydrate transport and metabolism]. |
| 366033 | Glyco_hydro_17 | 1.82e-15 | 29 | 297 | 2 | 304 | Glycosyl hydrolases family 17. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 2.02e-78 | 1 | 306 | 1 | 301 | |
| 3.96e-76 | 1 | 306 | 1 | 312 | |
| 7.30e-74 | 15 | 306 | 11 | 312 | |
| 7.56e-73 | 1 | 341 | 1 | 339 | |
| 3.32e-66 | 26 | 297 | 15 | 294 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6.72e-34 | 28 | 298 | 38 | 290 | Crystal structure of glycoside hydrolase family 17 beta-1,3-glucanosyltransferase from Rhizomucor miehei [Rhizomucor miehei CAU432] |
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| 4.86e-33 | 28 | 298 | 38 | 290 | Active-site mutant of Rhizomucor miehei beta-1,3-glucanosyltransferase in complex with laminaribiose [Rhizomucor miehei CAU432],4WTS_A Active-site mutant of Rhizomucor miehei beta-1,3-glucanosyltransferase in complex with laminaritriose [Rhizomucor miehei CAU432] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.79e-25 | 45 | 297 | 40 | 305 | Glucan 1,3-beta-glucosidase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=BGL2 PE=1 SV=1 |
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| 1.62e-23 | 8 | 290 | 4 | 289 | Glucan 1,3-beta-glucosidase ARB_02797 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_02797 PE=1 SV=1 |
|
| 7.28e-22 | 45 | 297 | 35 | 300 | Glucan 1,3-beta-glucosidase OS=Candida albicans OX=5476 GN=BGL2 PE=3 SV=1 |
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| 7.28e-22 | 45 | 297 | 35 | 300 | Glucan 1,3-beta-glucosidase BGL2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=BGL2 PE=1 SV=2 |
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| 2.18e-20 | 23 | 297 | 354 | 641 | Probable glucan endo-1,3-beta-glucosidase btgC OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=btgC PE=3 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.048904 | 0.951071 | CS pos: 22-23. Pr: 0.8234 |