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CAZyme Information: HpaG809339:RNA-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Hyaloperonospora arabidopsidis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Hyaloperonospora; Hyaloperonospora arabidopsidis | |||||||||||
| CAZyme ID | HpaG809339:RNA-p1 | |||||||||||
| CAZy Family | GH81 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.1.1.11:1 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CE8 | 66 | 341 | 1.7e-67 | 0.9236111111111112 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 178051 | PLN02432 | 3.61e-43 | 56 | 340 | 8 | 272 | putative pectinesterase |
| 178113 | PLN02497 | 3.59e-38 | 147 | 342 | 114 | 308 | probable pectinesterase |
| 395871 | Pectinesterase | 2.93e-37 | 59 | 338 | 2 | 276 | Pectinesterase. |
| 178372 | PLN02773 | 4.39e-37 | 91 | 340 | 37 | 282 | pectinesterase |
| 178276 | PLN02671 | 4.30e-36 | 59 | 340 | 61 | 337 | pectinesterase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 9.99e-190 | 24 | 365 | 1 | 343 | |
| 3.01e-149 | 45 | 366 | 23 | 345 | |
| 8.61e-149 | 45 | 366 | 23 | 345 | |
| 6.35e-147 | 24 | 365 | 1 | 338 | |
| 9.23e-142 | 27 | 365 | 3 | 348 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.41e-52 | 51 | 364 | 3 | 299 | Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015] |
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| 1.98e-52 | 51 | 364 | 3 | 299 | Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015] |
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| 7.87e-27 | 52 | 338 | 4 | 283 | Pectin methylesterase from Carrot [Daucus carota] |
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| 1.45e-26 | 59 | 338 | 7 | 279 | Chain A, Pectinesterase 1 [Solanum lycopersicum] |
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| 7.17e-11 | 162 | 328 | 159 | 366 | The structure of rice weevil pectin methyl esterase [Sitophilus oryzae] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5.41e-74 | 51 | 364 | 20 | 330 | Pectinesterase OS=Aspergillus aculeatus OX=5053 GN=pme1 PE=2 SV=1 |
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| 3.40e-72 | 51 | 365 | 20 | 330 | Pectinesterase OS=Aspergillus niger OX=5061 GN=pme1 PE=1 SV=1 |
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| 1.18e-57 | 51 | 364 | 28 | 324 | Probable pectinesterase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pmeA PE=3 SV=1 |
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| 1.18e-57 | 51 | 364 | 28 | 324 | Probable pectinesterase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pmeA PE=3 SV=1 |
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| 3.30e-57 | 51 | 364 | 28 | 324 | Probable pectinesterase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pmeA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.052588 | 0.947374 | CS pos: 41-42. Pr: 0.8160 |