CAZyme Information: HpaG808936:RNA-p1

Basic Information

• Species: Hyaloperonospora arabidopsidis
• Lineage: Oomycota; NA; ; Peronosporaceae; Hyaloperonospora; Hyaloperonospora arabidopsidis
• CAZyme ID: HpaG808936:RNA-p1
• CAZy Family: GH81
• CAZyme Description: unspecified product

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
303	HaraEmoy2_SC0091|CGC1	33360.62	4.6003

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_HarabidopsidisEmoy2	14267	559515	285	13982

• Gene Location: location=HaraEmoy2_SC0091:21063-21974(-)

Full Sequence      

MVFSSKIFCMAVFASGYITAPTAADGKAQKLPWSGRAFDLTLDTLEEKYWTHILTMRNNS
NGKTSDYVTVKQEGRSPPYNNDTGTITIGVDKDAIFKAQINFCRSELAQNVSANLKGTTF
FRTSMMKEEAFRNPYAWQAIFPESHLFEIRVDASKSPAKLIYLNNGTWDAKWETDFVPGT
WYNFGVAIKAAPSGKGVVVDFYMSEGDEDLVLKTTHELVTELPSWYEFHIGLLTLSDDGS
APKMDAKQDIMSFNGVSVEAEVVTTASGIADEVPVGDAAYIQNEVPVTATKMGIVKSGEN
CAE

Enzyme Prediction     

No EC number prediction in HpaG808936:RNA-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH131	60	268	6.1e-21	0.8588235294117647

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
408085	GH131_N	1.37e-58	31	264	1	251	Glycoside hydrolase 131 catalytic N-terminal domain. This is the N-terminal domain found in glycoside hydrolase family 131 (GH131A) protein observed in Coprinopsis cinerea. GH131A exhibits bifunctional exo-beta-1,3-/-1,6- and endo-beta-1,4 activity toward beta-glucan. This domain is catalytic in nature though the catalytic mechanism of C. cinerea GH131A is different from that of typical glycosidases that use a pair of carboxylic acid residues as the catalytic residues. In the case of GH131A, Glu98 and His218 may form a catalytic dyad and Glu98 may activate His218 during catalysis.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
UIZ26396.1|GH131	2.19e-102	1	296	1	294
CCD28226.1|GH131	4.95e-97	27	266	18	256
UIZ26845.1|GH131	9.13e-89	6	266	342	602
CCA28146.1|GH0	3.59e-19	31	262	22	251
CCA67649.1|CBM1|GH131	8.24e-13	59	268	49	245

PDB Hits     

HpaG808936:RNA-p1 has no PDB hit.

Swiss-Prot Hits     

HpaG808936:RNA-p1 has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000478	0.999480	CS pos: 24-25. Pr: 0.8931

TMHMM  Annotations     

There is no transmembrane helices in HpaG808936:RNA-p1.