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CAZyme Information: HpaG808164:RNA-p1

You are here: Home > Sequence: HpaG808164:RNA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Hyaloperonospora arabidopsidis
Lineage Oomycota; NA; ; Peronosporaceae; Hyaloperonospora; Hyaloperonospora arabidopsidis
CAZyme ID HpaG808164:RNA-p1
CAZy Family GH5
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
191 21935.75 9.6336
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_HarabidopsidisEmoy2 14267 559515 285 13982
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in HpaG808164:RNA-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT71 1 182 3.4e-27 0.6098484848484849

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
402574 Mannosyl_trans3 2.20e-12 1 181 88 251
Mannosyltransferase putative. This family is conserved in fungi. Several members are annotated as being alpha-1,3-mannosyltransferase but this could not be confirmed.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
6.93e-80 1 191 211 401
1.42e-55 1 191 243 431
9.14e-52 1 181 133 321
2.26e-41 1 178 174 355
9.19e-40 3 191 249 402

PDB Hits      help

HpaG808164:RNA-p1 has no PDB hit.

Swiss-Prot Hits      help

HpaG808164:RNA-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000024 0.000001

TMHMM  Annotations      help

There is no transmembrane helices in HpaG808164:RNA-p1.