CAZyme Information: HpaG807935:RNA-p1

Basic Information

• Species: Hyaloperonospora arabidopsidis
• Lineage: Oomycota; NA; ; Peronosporaceae; Hyaloperonospora; Hyaloperonospora arabidopsidis
• CAZyme ID: HpaG807935:RNA-p1
• CAZy Family: GH5
• CAZyme Description: unspecified product

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
755		83064.84	4.7994

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_HarabidopsidisEmoy2	14267	559515	285	13982

• Gene Location: location=HaraEmoy2_SC0071:213975-216242(+)

Full Sequence      

MGLAAIMIWTLLCSTVTVCTVLAATKDFTGTTYPTKSGIKIWVDPETPADQHKYISSRGR
TWDLVMSDEYNVANRSFRPGDDHIWTSLEKPDGVNGALELYSHNMTSTKCDSDGTCYFYI
EVTDEVNVFKVFNLYRHPPGYENAYFYYRAAMVQSWNKFCFQGGMLEVRAQLPGAVSKES
GNPDLALGESGRAKTAKFYPTWPGIWMMGNLGRAIFSASTNRMWPYSYDKCEPEVLPPEN
QRINACNDNPGYGLNPNQGRGAPEIDLLEGSGTVISSSLQIAPGMPTDFRLFPADAAGAD
AADPYCVYTYDCKTPGANMIDVPTSHYKKERGHKSWYQGLRYGANNHCRPDPKAKQDYDT
VAASVKSGITKNTCSVETCPASVDVNGDLGFMDATKTSHWGINSNGTCYPIMNSYMGAYL
CDPDNTNVLCTTPRNSSTPKSSSMSGFNYQMDAISSNWPIHLGGYLGYLKYQLEWVTGEN
GYVRWMLDGSALFEVTTEALSNVPQNSEKNNPQKNMLEEPMYLIYNVALSSSWGTTPPNA
GEECRGNGTDPVANAICDSFPMFMKIDYIRLYQDQGDDLDKDNYMQVGCDPSTHPTKTWI
DEHIEEYVDEDNPWREVSGKAFCTIDDDCTIGSSVGTASLKTGKCVEGRCQCSHSTSWGG
PRCTTALSGSTSTSATNLSQRAYGPPMSLSMSIAAIVVFLSIVSVYMSMVSMENEAAALT
KSSVQTKVAGSIDEGNSLTHSMNQRPKDNYSQNFV

Enzyme Prediction     

EC	-	-

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH16	68	285	5e-64	0.5858895705521472

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
397841	SKN1	1.13e-64	29	607	83	476	Beta-glucan synthesis-associated protein (SKN1). This family consists of the beta-glucan synthesis-associated proteins KRE6 and SKN1. Beta1,6-Glucan is a key component of the yeast cell wall, interconnecting cell wall proteins, beta1,3-glucan, and chitin. It has been postulated that the synthesis of beta1,6-glucan begins in the endoplasmic reticulum with the formation of protein-bound primer structures and that these primer structures are extended in the Golgi complex by two putative glucosyltransferases that are functionally redundant, Kre6 and Skn1. This is followed by maturation steps at the cell surface and by coupling to other cell wall macromolecules.
185689	GH16_fungal_KRE6_glucanase	2.87e-48	64	573	1	295	Saccharomyces cerevisiae KRE6 and related glucanses, member of glycosyl hydrolase family 16. KRE6 is a Saccharomyces cerevisiae glucanase that participates in the synthesis of beta-1,6-glucan, a major structural component of the cell wall. It is a golgi membrane protein required for normal beta-1,6-glucan levels in the cell wall. KRE6 is closely realted to laminarinase, a glycosyl hydrolase family 16 member that hydrolyzes 1,3-beta-D-glucosidic linkages in 1,3-beta-D-glucans such as laminarins, curdlans, paramylons, and pachymans, with very limited action on mixed-link (1,3-1,4-)-beta-D-glucans.
185693	GH16_laminarinase_like	3.70e-09	471	572	163	235	Laminarinase, member of the glycosyl hydrolase family 16. Laminarinase, also known as glucan endo-1,3-beta-D-glucosidase, is a glycosyl hydrolase family 16 member that hydrolyzes 1,3-beta-D-glucosidic linkages in 1,3-beta-D-glucans such as laminarins, curdlans, paramylons, and pachymans, with very limited action on mixed-link (1,3-1,4-)-beta-D-glucans.
225182	BglS	1.27e-07	142	232	97	157	Beta-glucanase, GH16 family [Carbohydrate transport and metabolism].
185693	GH16_laminarinase_like	5.83e-05	136	227	52	113	Laminarinase, member of the glycosyl hydrolase family 16. Laminarinase, also known as glucan endo-1,3-beta-D-glucosidase, is a glycosyl hydrolase family 16 member that hydrolyzes 1,3-beta-D-glucosidic linkages in 1,3-beta-D-glucans such as laminarins, curdlans, paramylons, and pachymans, with very limited action on mixed-link (1,3-1,4-)-beta-D-glucans.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
UIZ28149.1|GH16	0.0	24	755	20	754
UIZ27810.1|GH16	0.0	33	754	65	783
UIZ28151.1|GH16	0.0	30	755	27	752
UIZ28152.1|GH16	0.0	21	755	6	739
UIZ28150.1|GH16	1.74e-316	66	755	1	688

PDB Hits     

HpaG807935:RNA-p1 has no PDB hit.

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|P33336|SKN1_YEAST	3.53e-38	26	622	341	754	Beta-glucan synthesis-associated protein SKN1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SKN1 PE=1 SV=1
sp|P32486|KRE6_YEAST	4.75e-38	33	649	296	715	Beta-glucan synthesis-associated protein KRE6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=KRE6 PE=1 SV=2
sp|P87024|SKN1_CANAX	2.28e-36	33	607	325	714	Beta-glucan synthesis-associated protein SKN1 OS=Candida albicans OX=5476 GN=SKN1 PE=2 SV=1
sp|P87023|KRE6_CANAX	3.04e-33	33	607	321	717	Beta-glucan synthesis-associated protein KRE6 OS=Candida albicans OX=5476 GN=KRE6 PE=2 SV=1
sp|O13941|YEPB_SCHPO	1.65e-29	43	619	219	615	Uncharacterized beta-glucan synthesis-associated protein C23H3.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC23H3.11c PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000751	0.999236	CS pos: 23-24. Pr: 0.9723

TMHMM  Annotations     

Start	End
2	24
688	710