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CAZyme Information: HpaG807818:RNA-p1

You are here: Home > Sequence: HpaG807818:RNA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Hyaloperonospora arabidopsidis
Lineage Oomycota; NA; ; Peronosporaceae; Hyaloperonospora; Hyaloperonospora arabidopsidis
CAZyme ID HpaG807818:RNA-p1
CAZy Family GH5
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
550 60989.21 4.7651
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_HarabidopsidisEmoy2 14267 559515 285 13982
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.21:2 3.2.1.23:1 3.2.1.38:1 3.2.1.-:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH1 30 425 1.5e-61 0.8904428904428905

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395176 Glyco_hydro_1 3.06e-54 32 425 5 408
Glycosyl hydrolase family 1.
225343 BglB 2.41e-41 32 321 4 297
Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism].
215435 PLN02814 3.14e-41 15 313 6 320
beta-glucosidase
215455 PLN02849 3.06e-36 7 313 5 322
beta-glucosidase
215539 PLN02998 1.57e-34 4 313 3 326
beta-glucosidase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
4.31e-147 74 550 7 503
3.76e-88 31 473 12 503
4.93e-87 10 467 5 507
1.47e-86 30 475 30 523
1.08e-43 30 448 2 432

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.37e-39 26 350 28 364
Chain A, Beta-glucosidase Os4BGlu12 [Oryza sativa],3PTK_B Chain B, Beta-glucosidase Os4BGlu12 [Oryza sativa],3PTM_A Chain A, Beta-glucosidase Os4BGlu12 [Oryza sativa],3PTM_B Chain B, Beta-glucosidase Os4BGlu12 [Oryza sativa],3PTQ_A Chain A, Beta-glucosidase Os4BGlu12 [Oryza sativa],3PTQ_B Chain B, Beta-glucosidase Os4BGlu12 [Oryza sativa]
6.07e-37 32 318 39 343
Crystal structure of beta-primeverosidase [Camellia sinensis],3WQ4_B Crystal structure of beta-primeverosidase [Camellia sinensis],3WQ5_A beta-Primeverosidase in complex with disaccharide substrate-analog N-beta-primeverosylamidine, natural aglycone derivative [Camellia sinensis],3WQ5_B beta-Primeverosidase in complex with disaccharide substrate-analog N-beta-primeverosylamidine, natural aglycone derivative [Camellia sinensis],3WQ6_A beta-Primeverosidase in complex with disaccharide substrate-analog N-beta-primeverosylamidine, artificial aglycone derivative [Camellia sinensis],3WQ6_B beta-Primeverosidase in complex with disaccharide substrate-analog N-beta-primeverosylamidine, artificial aglycone derivative [Camellia sinensis]
3.08e-36 32 423 13 419
Chimeric Family 1 beta-glucosidase made with non-contiguous SCHEMA [Thermotoga maritima MSB8],4GXP_B Chimeric Family 1 beta-glucosidase made with non-contiguous SCHEMA [Thermotoga maritima MSB8],4GXP_C Chimeric Family 1 beta-glucosidase made with non-contiguous SCHEMA [Thermotoga maritima MSB8]
5.12e-36 32 423 11 404
Chain A, ANCESTRAL RECONSTRUCTED GLYCOSIDASE [synthetic construct],6Z1H_B Chain B, ANCESTRAL RECONSTRUCTED GLYCOSIDASE [synthetic construct],6Z1M_A Chain A, Ancestral reconstructed glycosidase [synthetic construct],6Z1M_B Chain B, Ancestral reconstructed glycosidase [synthetic construct],6Z1M_C Chain C, Ancestral reconstructed glycosidase [synthetic construct]
1.11e-35 26 423 15 438
Chain A, Beta-glucosidase 42 [Arabidopsis thaliana]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.61e-39 24 318 66 374
Furcatin hydrolase OS=Viburnum furcatum OX=237940 PE=1 SV=1
1.25e-38 32 318 35 325
Beta-glucosidase 29 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU29 PE=2 SV=2
1.39e-38 11 423 5 452
Beta-glucosidase 25 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU25 PE=2 SV=2
2.26e-38 32 320 30 336
Coniferin beta-glucosidase OS=Pinus contorta OX=3339 PE=1 SV=1
2.97e-38 26 350 33 369
Beta-glucosidase 12 OS=Oryza sativa subsp. indica OX=39946 GN=BGLU12 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000223 0.999741 CS pos: 24-25. Pr: 0.9727

TMHMM  Annotations      download full data without filtering help

Start End
7 29