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CAZyme Information: HpaG805451:RNA-p1

You are here: Home > Sequence: HpaG805451:RNA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Hyaloperonospora arabidopsidis
Lineage Oomycota; NA; ; Peronosporaceae; Hyaloperonospora; Hyaloperonospora arabidopsidis
CAZyme ID HpaG805451:RNA-p1
CAZy Family GH3
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
638 71076.75 4.6918
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_HarabidopsidisEmoy2 14267 559515 285 13982
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.28:16

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH37 67 620 1.5e-155 0.9959266802443992

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
215307 PLN02567 0.0 67 620 27 544
alpha,alpha-trehalase
395961 Trehalase 3.12e-159 65 620 1 508
Trehalase. Trehalase (EC:3.2.1.28) is known to recycle trehalose to glucose. Trehalose is a physiological hallmark of heat-shock response in yeast and protects of proteins and membranes against a variety of stresses. This family is found in conjunction with pfam07492 in fungi.
224541 TreA 1.35e-103 48 624 52 556
Neutral trehalase [Carbohydrate transport and metabolism].
237326 treA 2.35e-91 55 617 49 533
alpha,alpha-trehalase TreA.
183936 treA 1.22e-90 56 620 51 536
alpha,alpha-trehalase TreA.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.91e-311 16 611 3 595
1.33e-225 44 624 43 613
4.08e-201 44 624 170 746
3.65e-194 3 626 82 707
3.65e-194 3 626 82 707

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
8.34e-108 69 620 40 554
Chain A, Trehalase [Arabidopsis thaliana],7E9U_B Chain B, Trehalase [Arabidopsis thaliana]
1.28e-106 69 620 40 554
Chain A, Trehalase [Arabidopsis thaliana],7E9X_B Chain B, Trehalase [Arabidopsis thaliana],7E9X_C Chain C, Trehalase [Arabidopsis thaliana],7E9X_D Chain D, Trehalase [Arabidopsis thaliana],7EAW_A Chain A, Trehalase [Arabidopsis thaliana],7EAW_B Chain B, Trehalase [Arabidopsis thaliana]
1.00e-82 55 619 52 538
Structure of periplasmic trehalase from Diamondback moth gut bacteria complexed with validoxylamine [Enterobacter cloacae],5Z6H_A Structure of periplasmic trehalase from Diamondback moth gut bacteria in the apo form [Enterobacter cloacae],5Z6H_B Structure of periplasmic trehalase from Diamondback moth gut bacteria in the apo form [Enterobacter cloacae]
8.04e-80 55 617 15 499
Family 37 trehalase from Escherichia coli in complex with 1- thiatrehazolin [Escherichia coli K-12],2JJB_A Family 37 trehalase from Escherichia coli in complex with casuarine-6- O-alpha-glucopyranose [Escherichia coli K-12],2JJB_B Family 37 trehalase from Escherichia coli in complex with casuarine-6- O-alpha-glucopyranose [Escherichia coli K-12],2JJB_C Family 37 trehalase from Escherichia coli in complex with casuarine-6- O-alpha-glucopyranose [Escherichia coli K-12],2JJB_D Family 37 trehalase from Escherichia coli in complex with casuarine-6- O-alpha-glucopyranose [Escherichia coli K-12],2WYN_A Structure of family 37 trehalase from Escherichia coli in complex with a casuarine-6-O-a-D-glucoside analogue [Escherichia coli K-12],2WYN_B Structure of family 37 trehalase from Escherichia coli in complex with a casuarine-6-O-a-D-glucoside analogue [Escherichia coli K-12],2WYN_C Structure of family 37 trehalase from Escherichia coli in complex with a casuarine-6-O-a-D-glucoside analogue [Escherichia coli K-12],2WYN_D Structure of family 37 trehalase from Escherichia coli in complex with a casuarine-6-O-a-D-glucoside analogue [Escherichia coli K-12]
7.12e-75 55 617 15 499
Family 37 trehalase from Escherichia coli in complex with validoxylamine [Escherichia coli K-12]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.19e-125 50 624 28 551
Trehalase OS=Mus musculus OX=10090 GN=Treh PE=1 SV=1
2.35e-121 51 627 49 585
Trehalase OS=Pimpla hypochondriaca OX=135724 GN=tre1 PE=1 SV=1
8.48e-120 51 631 45 579
Trehalase OS=Apis mellifera OX=7460 PE=1 SV=1
2.11e-118 51 624 32 554
Trehalase OS=Homo sapiens OX=9606 GN=TREH PE=1 SV=2
7.93e-117 50 626 31 555
Trehalase OS=Oryctolagus cuniculus OX=9986 GN=TREH PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000042 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in HpaG805451:RNA-p1.