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CAZyme Information: HpaG805450:RNA-p1

You are here: Home > Sequence: HpaG805450:RNA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Hyaloperonospora arabidopsidis
Lineage Oomycota; NA; ; Peronosporaceae; Hyaloperonospora; Hyaloperonospora arabidopsidis
CAZyme ID HpaG805450:RNA-p1
CAZy Family GH3
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
650 HaraEmoy2_SC0038|CGC1 72502.52 4.7678
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_HarabidopsidisEmoy2 14267 559515 285 13982
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.28:16

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH37 79 632 1.6e-155 0.9959266802443992

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
215307 PLN02567 0.0 79 632 27 544
alpha,alpha-trehalase
395961 Trehalase 1.34e-159 77 632 1 508
Trehalase. Trehalase (EC:3.2.1.28) is known to recycle trehalose to glucose. Trehalose is a physiological hallmark of heat-shock response in yeast and protects of proteins and membranes against a variety of stresses. This family is found in conjunction with pfam07492 in fungi.
224541 TreA 8.56e-104 60 636 52 556
Neutral trehalase [Carbohydrate transport and metabolism].
237326 treA 1.17e-91 67 629 49 533
alpha,alpha-trehalase TreA.
183936 treA 9.16e-91 68 632 51 536
alpha,alpha-trehalase TreA.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
4.60e-311 28 623 3 595
2.04e-225 56 636 43 613
6.22e-201 56 636 170 746
3.92e-194 15 638 82 707
3.92e-194 15 638 82 707

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.17e-107 81 632 40 554
Chain A, Trehalase [Arabidopsis thaliana],7E9U_B Chain B, Trehalase [Arabidopsis thaliana]
1.79e-106 81 632 40 554
Chain A, Trehalase [Arabidopsis thaliana],7E9X_B Chain B, Trehalase [Arabidopsis thaliana],7E9X_C Chain C, Trehalase [Arabidopsis thaliana],7E9X_D Chain D, Trehalase [Arabidopsis thaliana],7EAW_A Chain A, Trehalase [Arabidopsis thaliana],7EAW_B Chain B, Trehalase [Arabidopsis thaliana]
1.34e-82 67 631 52 538
Structure of periplasmic trehalase from Diamondback moth gut bacteria complexed with validoxylamine [Enterobacter cloacae],5Z6H_A Structure of periplasmic trehalase from Diamondback moth gut bacteria in the apo form [Enterobacter cloacae],5Z6H_B Structure of periplasmic trehalase from Diamondback moth gut bacteria in the apo form [Enterobacter cloacae]
1.06e-79 67 629 15 499
Family 37 trehalase from Escherichia coli in complex with 1- thiatrehazolin [Escherichia coli K-12],2JJB_A Family 37 trehalase from Escherichia coli in complex with casuarine-6- O-alpha-glucopyranose [Escherichia coli K-12],2JJB_B Family 37 trehalase from Escherichia coli in complex with casuarine-6- O-alpha-glucopyranose [Escherichia coli K-12],2JJB_C Family 37 trehalase from Escherichia coli in complex with casuarine-6- O-alpha-glucopyranose [Escherichia coli K-12],2JJB_D Family 37 trehalase from Escherichia coli in complex with casuarine-6- O-alpha-glucopyranose [Escherichia coli K-12],2WYN_A Structure of family 37 trehalase from Escherichia coli in complex with a casuarine-6-O-a-D-glucoside analogue [Escherichia coli K-12],2WYN_B Structure of family 37 trehalase from Escherichia coli in complex with a casuarine-6-O-a-D-glucoside analogue [Escherichia coli K-12],2WYN_C Structure of family 37 trehalase from Escherichia coli in complex with a casuarine-6-O-a-D-glucoside analogue [Escherichia coli K-12],2WYN_D Structure of family 37 trehalase from Escherichia coli in complex with a casuarine-6-O-a-D-glucoside analogue [Escherichia coli K-12]
9.31e-75 67 629 15 499
Family 37 trehalase from Escherichia coli in complex with validoxylamine [Escherichia coli K-12]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.71e-125 62 636 28 551
Trehalase OS=Mus musculus OX=10090 GN=Treh PE=1 SV=1
3.35e-121 63 639 49 585
Trehalase OS=Pimpla hypochondriaca OX=135724 GN=tre1 PE=1 SV=1
1.21e-119 63 643 45 579
Trehalase OS=Apis mellifera OX=7460 PE=1 SV=1
3.01e-118 63 636 32 554
Trehalase OS=Homo sapiens OX=9606 GN=TREH PE=1 SV=2
1.13e-116 62 638 31 555
Trehalase OS=Oryctolagus cuniculus OX=9986 GN=TREH PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.960861 0.039134

TMHMM  Annotations      help

There is no transmembrane helices in HpaG805450:RNA-p1.