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CAZyme Information: HpaG804003:RNA-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Hyaloperonospora arabidopsidis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Hyaloperonospora; Hyaloperonospora arabidopsidis | |||||||||||
| CAZyme ID | HpaG804003:RNA-p1 | |||||||||||
| CAZy Family | GH16 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.1.1.11:1 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CE8 | 36 | 295 | 1.1e-71 | 0.8680555555555556 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395871 | Pectinesterase | 7.93e-43 | 34 | 295 | 6 | 264 | Pectinesterase. |
| 178113 | PLN02497 | 5.83e-40 | 40 | 295 | 45 | 292 | probable pectinesterase |
| 178372 | PLN02773 | 5.88e-39 | 40 | 295 | 18 | 268 | pectinesterase |
| 215173 | PLN02304 | 8.34e-39 | 44 | 295 | 95 | 340 | probable pectinesterase |
| 178051 | PLN02432 | 1.50e-38 | 40 | 295 | 24 | 258 | putative pectinesterase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 1.60e-114 | 3 | 294 | 13 | 298 | |
| 9.84e-111 | 3 | 294 | 13 | 298 | |
| 1.08e-108 | 11 | 295 | 23 | 304 | |
| 3.07e-106 | 11 | 295 | 23 | 305 | |
| 4.35e-106 | 11 | 295 | 23 | 305 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.42e-53 | 16 | 294 | 2 | 263 | Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015] |
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| 3.42e-53 | 16 | 294 | 2 | 263 | Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015] |
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| 1.75e-28 | 21 | 294 | 7 | 270 | Pectin methylesterase from Carrot [Daucus carota] |
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| 8.58e-26 | 22 | 295 | 3 | 267 | Chain A, Pectinesterase 1 [Solanum lycopersicum] |
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| 6.39e-08 | 59 | 295 | 63 | 333 | Pectin methylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7.52e-69 | 16 | 294 | 19 | 294 | Pectinesterase OS=Aspergillus aculeatus OX=5053 GN=pme1 PE=2 SV=1 |
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| 7.52e-69 | 16 | 294 | 19 | 293 | Pectinesterase OS=Aspergillus niger OX=5061 GN=pme1 PE=1 SV=1 |
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| 7.85e-61 | 16 | 275 | 28 | 272 | Pectinesterase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pmeA PE=1 SV=1 |
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| 2.14e-60 | 17 | 294 | 28 | 288 | Probable pectinesterase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pmeA PE=3 SV=1 |
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| 2.14e-60 | 17 | 294 | 28 | 288 | Probable pectinesterase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pmeA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 1.000049 | 0.000008 |