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CAZyme Information: HpaG802486:RNA-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Hyaloperonospora arabidopsidis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Hyaloperonospora; Hyaloperonospora arabidopsidis | |||||||||||
| CAZyme ID | HpaG802486:RNA-p1 | |||||||||||
| CAZy Family | GH12 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| AA1 | 54 | 541 | 1e-85 | 0.952513966480447 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 274555 | ascorbase | 1.06e-64 | 25 | 550 | 1 | 526 | L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. |
| 177843 | PLN02191 | 3.50e-60 | 18 | 550 | 16 | 549 | L-ascorbate oxidase |
| 215324 | PLN02604 | 1.03e-52 | 66 | 547 | 62 | 546 | oxidoreductase |
| 225043 | SufI | 5.62e-47 | 61 | 536 | 66 | 437 | Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA) [Cell cycle control, cell division, chromosome partitioning, Inorganic ion transport and metabolism, Cell wall/membrane/envelope biogenesis]. |
| 274556 | laccase | 2.23e-43 | 66 | 546 | 41 | 518 | laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 0.0 | 10 | 577 | 7 | 571 | |
| 0.0 | 8 | 577 | 7 | 569 | |
| 2.01e-190 | 11 | 576 | 11 | 551 | |
| 1.44e-183 | 25 | 576 | 16 | 543 | |
| 4.75e-73 | 26 | 546 | 42 | 535 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3.62e-58 | 67 | 547 | 42 | 468 | Chain A, LACCASE 1 [Coprinopsis cinerea] |
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| 3.70e-58 | 67 | 547 | 42 | 468 | Chain A, Laccase [Coprinopsis cinerea] |
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| 2.74e-57 | 11 | 562 | 9 | 502 | Chain A, Laccase [Rigidoporus microporus] |
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| 3.06e-56 | 66 | 570 | 41 | 485 | Crystal Structure of Laccase from Cerrena sp. RSD1 [Cerrena],5Z1X_B Crystal Structure of Laccase from Cerrena sp. RSD1 [Cerrena],5Z22_A Crystal Structure of Laccase from Cerrena sp. RSD1 [Cerrena] |
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| 1.13e-54 | 21 | 549 | 40 | 544 | Crystal structure of laccase from Botrytis aclada at 1.67 A resolution [Botrytis aclada],4X4K_A Structure of laccase from Botrytis aclada with full copper content [Botrytis aclada] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 8.18e-62 | 23 | 576 | 20 | 518 | Iron transport multicopper oxidase fetC OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=fetC PE=2 SV=1 |
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| 5.18e-59 | 28 | 577 | 27 | 523 | Iron transport multicopper oxidase fio1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=fio1 PE=3 SV=1 |
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| 5.06e-58 | 10 | 572 | 7 | 517 | Iron transport multicopper oxidase fetC OS=Epichloe festucae (strain E2368) OX=696363 GN=fetC PE=2 SV=1 |
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| 9.36e-58 | 66 | 551 | 75 | 502 | Laccase-2 OS=Pleurotus ostreatus OX=5322 GN=POX2 PE=1 SV=1 |
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| 4.58e-57 | 21 | 549 | 40 | 545 | Laccase-2 OS=Botryotinia fuckeliana OX=40559 GN=lcc2 PE=2 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000296 | 0.999675 | CS pos: 23-24. Pr: 0.7497 |