CAZyme Information: HpaG802206:RNA-p1

Basic Information

• Species: Hyaloperonospora arabidopsidis
• Lineage: Oomycota; NA; ; Peronosporaceae; Hyaloperonospora; Hyaloperonospora arabidopsidis
• CAZyme ID: HpaG802206:RNA-p1
• CAZy Family: CE8
• CAZyme Description: unspecified product

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
330		35952.42	5.3718

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_HarabidopsidisEmoy2	14267	559515	285	13982

• Gene Location: location=HaraEmoy2_SC0011:486525-487575(-)

Full Sequence      

MHSGNSPIGENAGERTNSNVWRDTSEAEIYGSYLGPGSEVPMMRPTMAARPSTSIHHDIS
VGQLDDPGLATGAGPAKTYTGRKVVWPGALFLLLATAAALSLIAYFGIQEYTAAQTQQAL
TEEVTDVTRARKRKSTSVKSCMLPDYIAADGKIYAQNSFTRKKEPLVFTGINWSGMENAE
GVPHGLATKQSYLDDIAKNLSDSGFNAVRLPLNAQMIIDNTAPNTKLFVNSLDTDLNVDT
YIDMIKKVVQGLGKQQIGVLLDIHKIDPNFTNDTSEHLWFTDAYPIAKIYEMFETLASEL
CSDLDQCGTSPTSSPCTNHTATDRRAGTRY

Enzyme Prediction     

No EC number prediction in HpaG802206:RNA-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH5	164	303	1.4e-51	0.4011627906976744

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
225344	BglC	9.93e-08	153	285	31	156	Aryl-phospho-beta-D-glucosidase BglC, GH1 family [Carbohydrate transport and metabolism].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ABL75348.1|GH5_20	2.06e-173	1	305	1	309
ABL75347.1|GH5_20	7.82e-170	1	305	1	308
UIZ24458.1|GH5_20	1.21e-166	11	305	8	305
CCA27479.1|GH5_20	4.27e-77	1	303	9	314
CCA26601.1|GH5_20	2.50e-73	20	304	22	304

PDB Hits     

HpaG802206:RNA-p1 has no PDB hit.

Swiss-Prot Hits     

HpaG802206:RNA-p1 has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
1.000046	0.000001

TMHMM  Annotations     

Start	End
84	106