CAZyme Information: HpaG800098:RNA-p1

Basic Information

• Species: Hyaloperonospora arabidopsidis
• Lineage: Oomycota; NA; ; Peronosporaceae; Hyaloperonospora; Hyaloperonospora arabidopsidis
• CAZyme ID: HpaG800098:RNA-p1
• CAZy Family: AA16
• CAZyme Description: unspecified product

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
809		88250.01	4.9191

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_HarabidopsidisEmoy2	14267	559515	285	13982

• Gene Location: location=HaraEmoy2_SC0001:356145-358574(+)

Full Sequence      

MWTSWSAAVSLAVAVTYASLPGAAVGQDAFDARAQAIVDKFNISQVLGQMTQVDINFAMN
LDTKTLNETSVRAYARRHVGSYFNALFAGRQESAPYGWTASEFRALIKRIQEITMEENGG
HPVIYGIDSVHGANYVEGAVMFPQQINMGASFNPELVYKAGQITARDTEAAGIPWIFGPI
LEISYNPLWARTYETFSEDPYVASVMGDAIIRGLQSYNQTAACMKHFIGYSKTERGHDRD
NTHISDYDLLNYYMPSFKAAVDAGVMTAMETYTSINGKPVVASSRILNDLLRTDLGFKGL
LVTDYAEINNLKDFHRVAKTYDDAVAMAMMQTSIDMSMVPNNANFIDQALKMLEKHPEQE
ARLRESAKRVVKTKLKLGLYENPIPGEQYVSMVGNDDDVQTALAMARESIVLLKNAENVL
PLPKTASVFLTGHSADNVGYQCGGWSKAWQGYSGNAMFPNGVSVRQGFEGLVGNSSFTYF
NGLQVNGSISDADLATAVKQASEHEYTVAVIGEEPYTEKLGDIDDLALPAGQVRYIEALR
ATNTKMIVVLFGGRPRLLGSIPDNSMAIINGMLACELGGKAMAEIIYGDVNPSGRLPLTY
PKDPANIAIPYNRLVTTRCAQGPCRMQFDFGTGLSYTQFNYTGLSLDTTRLTSASATVTA
TVTVTNVGARAGNETVMLFVIQPYRLISVPEVKQLKIFKKIELQPGQSMDVSFTLTTDDL
SVYDPQVGKGLKRVFEDSDYVVAIKPETNCDVYNDNSKHPLCAEFSIDTSGRPAPVQPSD
EAAPVQTNTVPSNAIFGASPVNSDVMPPV

Enzyme Prediction     

EC	3.2.1.21:1

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH3	117	339	1.6e-65	0.9768518518518519

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
185053	PRK15098	5.56e-105	10	744	6	750	beta-glucosidase BglX.
224389	BglX	2.62e-77	47	446	7	372	Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
395747	Glyco_hydro_3	1.49e-57	47	370	6	313	Glycosyl hydrolase family 3 N terminal domain.
178629	PLN03080	2.75e-52	136	729	108	756	Probable beta-xylosidase; Provisional
396478	Glyco_hydro_3_C	9.95e-46	410	636	1	216	Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
UIZ29009.1|GH3	0.0	1	768	1	763
UIZ29613.1|GH3	0.0	11	774	51	826
UIZ29432.1|GH3	2.11e-313	11	774	6	770
UIZ27116.1|GH3	1.93e-275	50	767	1	724
CCA27737.1|GH3	6.01e-273	33	771	67	812

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5JP0_A	1.29e-110	38	721	21	720	Bacteroides ovatus Xyloglucan PUL GH3B with bound glucose [Bacteroides ovatus],5JP0_B Bacteroides ovatus Xyloglucan PUL GH3B with bound glucose [Bacteroides ovatus]
6R5I_A	2.63e-83	122	727	73	705	Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5I_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5O_A	1.35e-82	122	727	73	705	Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5O_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5R_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5R_A	1.38e-82	122	727	74	706	Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
5M6G_A	1.91e-82	13	600	23	587	Crystal structure Glucan 1,4-beta-glucosidase from Saccharopolyspora erythraea [Saccharopolyspora erythraea D]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q23892|GLUA_DICDI	3.21e-136	37	744	83	811	Lysosomal beta glucosidase OS=Dictyostelium discoideum OX=44689 GN=gluA PE=1 SV=2
sp|A7LXU3|BGH3B_BACO1	9.32e-110	38	721	43	742	Beta-glucosidase BoGH3B OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02659 PE=1 SV=1
sp|T2KMH0|PLH24_FORAG	2.82e-79	106	751	46	713	Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1
sp|P33363|BGLX_ECOLI	4.20e-76	28	727	32	737	Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) OX=83333 GN=bglX PE=3 SV=2
sp|Q56078|BGLX_SALTY	5.57e-75	122	727	105	737	Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bglX PE=3 SV=2

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000286	0.999709	CS pos: 26-27. Pr: 0.8710

TMHMM  Annotations     

There is no transmembrane helices in HpaG800098:RNA-p1.