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CAZyme Information: HMPREF1541_08996-t46_1-p1

You are here: Home > Sequence: HMPREF1541_08996-t46_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Cyphellophora europaea
Lineage Ascomycota; Eurotiomycetes; ; Cyphellophoraceae; Cyphellophora; Cyphellophora europaea
CAZyme ID HMPREF1541_08996-t46_1-p1
CAZy Family GT2
CAZyme Description endo-1,4-beta-xylanase 1
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
232 KB822725|CGC6 25597.83 8.1965
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_CeuropaeaCBS101466 11153 1220924 59 11094
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.8:61

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH11 51 226 7.1e-76 0.9887005649717514

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395367 Glyco_hydro_11 4.70e-106 51 225 1 175
Glycosyl hydrolases family 11.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
6.02e-148 1 230 1 230
3.91e-146 1 230 1 229
1.12e-145 1 230 1 229
2.35e-145 1 230 1 230
2.35e-145 1 230 1 230

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.18e-88 43 228 4 190
Chain A, Endo-1,4-beta-xylanase [Thermochaetoides thermophila],1H1A_B Chain B, Endo-1,4-beta-xylanase [Thermochaetoides thermophila]
1.39e-88 43 228 4 190
Chain A, endoxylanase 11A [Thermochaetoides thermophila],1XNK_B Chain B, endoxylanase 11A [Thermochaetoides thermophila]
1.10e-86 43 231 3 189
3D Structure of a thermophilic family GH11 xylanase from Thermobifida fusca [Thermobifida fusca]
3.64e-86 43 231 7 193
Chain A, Endo-1,4-beta-xylanase [Actinomycetia bacterium],7EO6_B Chain B, Endo-1,4-beta-xylanase [Actinomycetia bacterium]
7.83e-86 43 226 5 186
Thermophilic b-1,4-xylanase from Nonomuraea flexuosa [Thermopolyspora flexuosa]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.32e-135 1 230 1 232
Endo-1,4-beta-xylanase G OS=Verticillium dahliae OX=27337 GN=xynG PE=1 SV=1
1.07e-132 1 231 1 231
Endo-1,4-beta-xylanase A OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=XYLA PE=1 SV=1
2.69e-125 1 230 1 226
Endo-1,4-beta-xylanase 2 OS=Humicola grisea var. thermoidea OX=5528 GN=xyn2 PE=1 SV=1
7.71e-125 1 230 1 226
Endo-1,4-beta-xylanase 1 OS=Humicola insolens OX=34413 GN=XYL1 PE=2 SV=1
7.34e-110 1 228 1 230
Probable endo-1,4-beta-xylanase A OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=xlnA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000432 0.999521 CS pos: 19-20. Pr: 0.9697

TMHMM  Annotations      help

There is no transmembrane helices in HMPREF1541_08996-t46_1-p1.