logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: HMPREF1541_06135-t46_1-p1

You are here: Home > Sequence: HMPREF1541_06135-t46_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Cyphellophora europaea
Lineage Ascomycota; Eurotiomycetes; ; Cyphellophoraceae; Cyphellophora; Cyphellophora europaea
CAZyme ID HMPREF1541_06135-t46_1-p1
CAZy Family GH3
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
382 44214.40 5.1796
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_CeuropaeaCBS101466 11153 1220924 59 11094
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in HMPREF1541_06135-t46_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT34 145 255 2.7e-18 0.43902439024390244

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
368535 Glyco_transf_34 3.73e-10 78 252 41 231
galactosyl transferase GMA12/MNN10 family. This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of C. elegans homologs where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.
215617 PLN03182 2.87e-06 73 176 163 264
xyloglucan 6-xylosyltransferase; Provisional
215616 PLN03181 1.00e-05 116 173 200 262
glycosyltransferase; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.29e-53 63 304 160 394
3.29e-53 63 304 160 394
3.29e-53 63 304 160 394
3.29e-53 63 304 160 394
6.04e-53 42 294 176 416

PDB Hits      help

HMPREF1541_06135-t46_1-p1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.50e-09 88 256 132 314
Probable alpha-1,2-galactosyltransferase gmh1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=gmh1 PE=3 SV=1
4.78e-06 75 176 158 257
Probable glycosyltransferase 7 OS=Oryza sativa subsp. indica OX=39946 GN=GT7 PE=3 SV=2
4.78e-06 75 176 158 257
Probable glycosyltransferase 7 OS=Oryza sativa subsp. japonica OX=39947 GN=GT7 PE=2 SV=1
5.02e-06 73 176 187 288
Probable glycosyltransferase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=GT6 PE=2 SV=1
8.26e-06 116 173 190 252
Galactomannan galactosyltransferase 1 OS=Cyamopsis tetragonoloba OX=3832 GN=GMGT1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000039 0.000010

TMHMM  Annotations      help

There is no transmembrane helices in HMPREF1541_06135-t46_1-p1.