logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: HMPREF1541_05236-t46_1-p1

You are here: Home > Sequence: HMPREF1541_05236-t46_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Cyphellophora europaea
Lineage Ascomycota; Eurotiomycetes; ; Cyphellophoraceae; Cyphellophora; Cyphellophora europaea
CAZyme ID HMPREF1541_05236-t46_1-p1
CAZy Family GH172
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
378 KB822720|CGC10 44103.03 5.1432
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_CeuropaeaCBS101466 11153 1220924 59 11094
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in HMPREF1541_05236-t46_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT17 73 356 4.1e-66 0.9894366197183099

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
398414 Glyco_transf_17 2.06e-40 52 355 35 342
Glycosyltransferase family 17. This family represents beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (EC:2.4.1.144). This enzyme transfers the bisecting GlcNAc to the core mannose of complex N-glycans. The addition of this residue is regulated during development and has functional consequences for receptor signalling, cell adhesion, and tumor progression.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
9.39e-104 8 372 7 356
6.52e-89 67 366 299 597
8.82e-86 66 372 65 395
8.82e-86 66 372 65 395
2.77e-81 60 372 59 395

PDB Hits      help

HMPREF1541_05236-t46_1-p1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.89e-06 92 356 206 499
Beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase OS=Homo sapiens OX=9606 GN=MGAT3 PE=1 SV=3
6.92e-06 92 356 210 503
Beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase OS=Rattus norvegicus OX=10116 GN=Mgat3 PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000077 0.000000

TMHMM  Annotations      download full data without filtering help

Start End
9 31