CAZyme Information: HMPREF1541_03401-t46_1-p1

Basic Information

• Species: Cyphellophora europaea
• Lineage: Ascomycota; Eurotiomycetes; ; Cyphellophoraceae; Cyphellophora; Cyphellophora europaea
• CAZyme ID: HMPREF1541_03401-t46_1-p1
• CAZy Family: GH115
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
892	KB822719|CGC6	98681.87	6.0154

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_CeuropaeaCBS101466	11153	1220924	59	11094

• Gene Location: location=KB822719:1349682-1352563(+)

Full Sequence      

MTQPALQAPQFEHHPTGFGIGCASPRLSWKFDTDSTTLPGWTQSAYEIEVALDDGTTETF
KHDGSSNLLVPWPHRPLRSSERAQVRVRAFGHAESRQPEATTWSPTAHLEVGLLEPVDWK
ASFITPAERFGPEFPLQPVRFRREFELPGDSSASPVRLYVTALGVYEASINGQVVSDECM
APGWTSYGHRLNYSVLDVTKFVMPGKPNVLAIEVGEGWYAGKLGFRGGTRFLYGGKELAA
FCQLQVDGKPVVVTDESWRCMPSAIVSSELYNGEVYDMRLEQAGWNAVGGDTSSFRPVTR
LDSPPQPLLVAPNAPPVRVIEERPAAAVFRSKSNKTIIDFGQNLVGRIRVKSLHLSTGHR
LTVRHAEVMEHGELGTRPLNEARCEDTVIGSGEELRNWTPKFTFHGFRYVQVEGWPGGDE
ALQDNVVALVMHSAIRRRGFFECSNHWVNRLGWTGDINVFAPTACYLYDTIGFLDDWLSS
LAVEQLADPNGIPGLVCPFVPLPDWPRIPQAVWHDVTIMLPEELFRFTSDVTVLERQFDS
MRAWLDKGVDRGADGLWDLYRWQLADWLDPTAPPQQPGLSLDRLRIGKDQLAREYAQQAT
TLLTRFQDKYITPSGNLMSNTQTGLALAITFNLYHTPHQLTTATQQLSKLVRAARFKIAT
GFAGTPRILEALTQTGQAPLAYRMLLQKECPGWLFPVIAMGATTVWERWDSMLPDGSINP
GSMTSFNHYALGAVAQWLHGRVGGLGMLAEGEAGWRTFRVRPVPGGNLTWAKTAFDGPCG
MIRVEWWVGLEKDDDGRDARQQQLGGRETKFRMKLTVPPNSRAVVTLPSEWAAAATAAAA
AAGEGEGAKEVERVVGSGVHEFACAYTAAEWPPKVLLPPNLTYSADMDEVAA

Enzyme Prediction     

EC	3.2.1.40:1	3.2.1.40:8	3.1.1.73:2

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH78	450	827	3.1e-83	0.7103174603174603
CBM67	137	305	1.6e-27	0.8920454545454546

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
407469	Bac_rhamnosid6H	4.21e-92	436	742	1	340	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
400715	Bac_rhamnosid_N	3.80e-62	156	321	6	172	Alpha-L-rhamnosidase N-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. This domain is probably involved in substrate recognition.
336149	Bac_rhamnosid	2.73e-33	330	432	2	102	Bacterial alpha-L-rhamnosidase concanavalin-like domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
379972	Bac_rhamnosid_C	6.22e-16	748	830	2	66	Bacterial alpha-L-rhamnosidase C-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
UPK92145.1|GH78	0.0	6	891	9	930
UQC79147.1|GH78	4.12e-314	1	880	1	913
QGI94869.1|GH78	8.62e-305	1	880	1	893
QKD53864.1|GH78	1.48e-300	1	886	1	899
QGI81256.1|GH78	3.35e-293	1	880	1	859

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6GSZ_A	1.22e-217	11	862	9	863	Crystal structure of native alfa-L-rhamnosidase from Aspergillus terreus [Aspergillus terreus]
3W5M_A	1.05e-117	62	869	216	1035	Crystal Structure of Streptomyces avermitilis alpha-L-rhamnosidase [Streptomyces avermitilis MA-4680 = NBRC 14893],3W5N_A Crystal Structure of Streptomyces avermitilis alpha-L-rhamnosidase complexed with L-rhamnose [Streptomyces avermitilis MA-4680 = NBRC 14893]
6I60_A	1.78e-71	19	828	45	899	Structure of alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12],6I60_B Structure of alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q82PP4|RHA78_STRAW	1.57e-116	62	830	216	997	Alpha-L-rhamnosidase OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) OX=227882 GN=SAVERM_828 PE=1 SV=1
sp|T2KNB2|PLH20_FORAG	2.80e-95	14	830	46	881	Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22090 PE=1 SV=2
sp|P9WF03|RHA78_ALTSL	3.40e-94	23	835	49	886	Alpha-L-rhamnosidase OS=Alteromonas sp. (strain LOR) OX=1537994 GN=LOR_34 PE=1 SV=1
sp|T2KPL4|PLH28_FORAG	1.31e-43	20	827	46	906	Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22170 PE=2 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
1.000073	0.000001

TMHMM  Annotations     

There is no transmembrane helices in HMPREF1541_03401-t46_1-p1.