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CAZyme Information: HCEG_03870-t36_1-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Histoplasma capsulatum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Eurotiomycetes; ; Ajellomycetaceae; Histoplasma; Histoplasma capsulatum | |||||||||||
| CAZyme ID | HCEG_03870-t36_1-p1 | |||||||||||
| CAZy Family | GH2 | |||||||||||
| CAZyme Description | GMC oxidoreductase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| AA3 | 45 | 674 | 3.5e-94 | 0.9947183098591549 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 225186 | BetA | 3.05e-67 | 39 | 677 | 1 | 538 | Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]. |
| 235000 | PRK02106 | 7.32e-67 | 42 | 673 | 2 | 532 | choline dehydrogenase; Validated |
| 398739 | GMC_oxred_C | 1.79e-33 | 526 | 668 | 5 | 143 | GMC oxidoreductase. This domain found associated with pfam00732. |
| 215420 | PLN02785 | 3.53e-23 | 316 | 654 | 235 | 558 | Protein HOTHEAD |
| 366272 | GMC_oxred_N | 1.92e-11 | 146 | 420 | 19 | 218 | GMC oxidoreductase. This family of proteins bind FAD as a cofactor. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 2.53e-317 | 9 | 676 | 8 | 677 | |
| 2.53e-317 | 9 | 676 | 8 | 677 | |
| 2.53e-317 | 9 | 676 | 8 | 677 | |
| 9.54e-316 | 39 | 676 | 23 | 658 | |
| 7.92e-306 | 36 | 678 | 44 | 680 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3.31e-39 | 45 | 678 | 13 | 532 | Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_B Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_C Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_D Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_E Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_F Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_G Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_H Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis] |
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| 3.31e-39 | 45 | 678 | 13 | 532 | Chain A, Choline oxidase [Arthrobacter globiformis],3LJP_B Chain B, Choline oxidase [Arthrobacter globiformis] |
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| 8.27e-39 | 45 | 678 | 13 | 532 | Crystal structure of choline oxidase reveals insights into the catalytic mechanism [Arthrobacter globiformis],2JBV_B Crystal structure of choline oxidase reveals insights into the catalytic mechanism [Arthrobacter globiformis],4MJW_A Crystal Structure of Choline Oxidase in Complex with the Reaction Product Glycine Betaine [Arthrobacter globiformis],4MJW_B Crystal Structure of Choline Oxidase in Complex with the Reaction Product Glycine Betaine [Arthrobacter globiformis] |
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| 5.45e-35 | 39 | 676 | 1 | 564 | Chain A, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis],6ZH7_B Chain B, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis] |
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| 1.23e-34 | 33 | 675 | 28 | 600 | Crystal structure of pyranose dehydrogenase from Agaricus meleagris, wildtype [Leucoagaricus meleagris] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.17e-45 | 44 | 674 | 3 | 532 | Oxygen-dependent choline dehydrogenase OS=Vibrio vulnificus (strain YJ016) OX=196600 GN=betA PE=3 SV=1 |
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| 1.60e-45 | 44 | 674 | 3 | 532 | Oxygen-dependent choline dehydrogenase OS=Vibrio vulnificus (strain CMCP6) OX=216895 GN=betA PE=3 SV=1 |
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| 1.93e-43 | 41 | 673 | 2 | 531 | Oxygen-dependent choline dehydrogenase OS=Photobacterium profundum (strain SS9) OX=298386 GN=betA PE=3 SV=1 |
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| 3.85e-43 | 44 | 672 | 41 | 573 | Choline dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Chdh PE=1 SV=1 |
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| 1.01e-42 | 39 | 672 | 39 | 576 | Choline dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Chdh PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.143540 | 0.856463 | CS pos: 19-20. Pr: 0.8182 |