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CAZyme Information: HCBG_03992-t26_1-p1

You are here: Home > Sequence: HCBG_03992-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Histoplasma capsulatum
Lineage Ascomycota; Eurotiomycetes; ; Ajellomycetaceae; Histoplasma; Histoplasma capsulatum
CAZyme ID HCBG_03992-t26_1-p1
CAZy Family GH20
CAZyme Description glucose-methanol-choline oxidoreductase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
568 GG663367|CGC2 62964.21 5.7327
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_HcapsulatumG186AR 9364 447093 110 9254
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in HCBG_03992-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 5 563 3.2e-147 0.9929577464788732

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
225186 BetA 2.20e-95 1 564 4 536
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
235000 PRK02106 2.44e-83 1 548 2 518
choline dehydrogenase; Validated
398739 GMC_oxred_C 7.42e-37 421 554 2 140
GMC oxidoreductase. This domain found associated with pfam00732.
215420 PLN02785 1.71e-29 5 537 56 552
Protein HOTHEAD
366272 GMC_oxred_N 8.27e-28 73 306 14 217
GMC oxidoreductase. This family of proteins bind FAD as a cofactor.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 568 1 564
5.63e-305 6 568 6 564
5.63e-305 6 568 6 564
5.63e-305 6 568 6 564
1.04e-301 6 564 6 560

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.04e-56 5 563 2 562
Crystal structure of aryl-alcohol oxidase from Pleurotus eryngii in complex with p-anisic acid [Pleurotus eryngii]
2.83e-56 5 563 3 563
Crystal structure of aryl-alcohol-oxidase from Pleurotus eryingii [Pleurotus eryngii]
1.74e-52 5 566 41 602
Crystal structure of pyranose dehydrogenase from Agaricus meleagris, wildtype [Leucoagaricus meleagris]
3.02e-49 5 559 14 524
Chain A, Choline oxidase [Arthrobacter globiformis],3LJP_B Chain B, Choline oxidase [Arthrobacter globiformis]
7.94e-49 5 559 14 524
Crystal structure of choline oxidase reveals insights into the catalytic mechanism [Arthrobacter globiformis],2JBV_B Crystal structure of choline oxidase reveals insights into the catalytic mechanism [Arthrobacter globiformis],4MJW_A Crystal Structure of Choline Oxidase in Complex with the Reaction Product Glycine Betaine [Arthrobacter globiformis],4MJW_B Crystal Structure of Choline Oxidase in Complex with the Reaction Product Glycine Betaine [Arthrobacter globiformis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.34e-56 5 566 41 611
Dehydrogenase pkfF OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pkfF PE=2 SV=1
1.06e-55 6 568 4 532
Oxygen-dependent choline dehydrogenase OS=Sinorhizobium medicae (strain WSM419) OX=366394 GN=betA PE=3 SV=1
4.13e-55 5 562 76 644
Versicolorin B synthase OS=Dothistroma septosporum (strain NZE10 / CBS 128990) OX=675120 GN=vbsA PE=2 SV=1
4.13e-55 5 562 76 644
Versicolorin B synthase OS=Dothistroma septosporum OX=64363 GN=vbsA PE=2 SV=2
7.50e-55 6 568 4 532
Oxygen-dependent choline dehydrogenase OS=Sinorhizobium fredii (strain NBRC 101917 / NGR234) OX=394 GN=betA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000063 0.000002

TMHMM  Annotations      help

There is no transmembrane helices in HCBG_03992-t26_1-p1.