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CAZyme Information: H310_06397-t26_1-p1

You are here: Home > Sequence: H310_06397-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aphanomyces invadans
Lineage Oomycota; NA; ; Saprolegniaceae; Aphanomyces; Aphanomyces invadans
CAZyme ID H310_06397-t26_1-p1
CAZy Family GH5
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
608 63495.40 6.9299
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AinvadansNJM9701 15416 N/A 168 15248
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 1.1.99.18:3

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 24 553 6.7e-118 0.9671532846715328

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
225186 BetA 3.97e-22 47 543 27 523
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
366272 GMC_oxred_N 1.03e-13 111 301 17 207
GMC oxidoreductase. This family of proteins bind FAD as a cofactor.
235000 PRK02106 1.60e-13 45 303 24 279
choline dehydrogenase; Validated
398739 GMC_oxred_C 1.01e-07 443 549 24 143
GMC oxidoreductase. This domain found associated with pfam00732.
215420 PLN02785 0.002 230 303 226 307
Protein HOTHEAD

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
9.42e-197 2 563 4 557
1.06e-192 25 563 22 557
2.61e-185 14 535 9 526
3.79e-184 18 564 15 560
1.25e-130 27 573 29 568

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
9.52e-54 26 555 2 536
Chain A, Cellobiose dehydrogenase [Phanerodontia chrysosporium],1NAA_B Chain B, Cellobiose dehydrogenase [Phanerodontia chrysosporium]
1.05e-53 26 555 7 541
Chain A, cellobiose dehydrogenase [Phanerodontia chrysosporium],1KDG_B Chain B, cellobiose dehydrogenase [Phanerodontia chrysosporium]
6.93e-45 11 564 218 773
Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A],4QI7_B Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A]
2.55e-37 27 574 8 556
Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides],4QI5_A Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides]
7.16e-37 15 574 217 778
Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.68e-52 14 555 221 768
Cellobiose dehydrogenase OS=Phanerodontia chrysosporium OX=2822231 GN=CDH-1 PE=1 SV=1
2.21e-13 27 302 3 278
Oxygen-dependent choline dehydrogenase OS=Serratia proteamaculans (strain 568) OX=399741 GN=betA PE=3 SV=1
6.92e-13 27 331 6 301
Oxygen-dependent choline dehydrogenase OS=Burkholderia pseudomallei (strain K96243) OX=272560 GN=betA PE=3 SV=1
7.36e-13 6 348 10 357
Dehydrogenase eriK OS=Hericium erinaceus OX=91752 GN=eriK PE=3 SV=1
1.60e-12 27 331 5 302
Oxygen-dependent choline dehydrogenase OS=Pseudomonas entomophila (strain L48) OX=384676 GN=betA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.993928 0.006110

TMHMM  Annotations      help

There is no transmembrane helices in H310_06397-t26_1-p1.