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CAZyme Information: H257_17041-t26_2-p1

You are here: Home > Sequence: H257_17041-t26_2-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aphanomyces astaci
Lineage Oomycota; NA; ; Saprolegniaceae; Aphanomyces; Aphanomyces astaci
CAZyme ID H257_17041-t26_2-p1
CAZy Family GT57
CAZyme Description hypothetical protein, variant 3
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
460 49662.76 6.6807
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AastaciAPO3 19584 N/A 465 19119
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 1.1.3.16:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 61 410 4.9e-70 0.6373239436619719

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
225186 BetA 8.55e-56 58 424 4 370
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
235000 PRK02106 2.29e-44 59 423 3 366
choline dehydrogenase; Validated
366272 GMC_oxred_N 4.64e-18 147 365 24 218
GMC oxidoreductase. This family of proteins bind FAD as a cofactor.
215420 PLN02785 9.21e-15 42 375 34 339
Protein HOTHEAD
223717 FixC 9.09e-07 59 96 1 36
Dehydrogenase (flavoprotein) [Energy production and conversion].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
4.95e-105 30 445 50 480
3.92e-34 60 456 56 449
4.89e-33 59 423 3 358
1.01e-31 60 428 58 424
1.56e-29 62 386 14 327

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.19e-31 55 401 7 348
Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_B Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_C Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_D Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_E Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_F Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_G Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_H Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis]
5.50e-31 55 401 7 348
Crystal structure of choline oxidase reveals insights into the catalytic mechanism [Arthrobacter globiformis],2JBV_B Crystal structure of choline oxidase reveals insights into the catalytic mechanism [Arthrobacter globiformis],4MJW_A Crystal Structure of Choline Oxidase in Complex with the Reaction Product Glycine Betaine [Arthrobacter globiformis],4MJW_B Crystal Structure of Choline Oxidase in Complex with the Reaction Product Glycine Betaine [Arthrobacter globiformis]
5.50e-31 55 401 7 348
Chain A, Choline oxidase [Arthrobacter globiformis],3LJP_B Chain B, Choline oxidase [Arthrobacter globiformis]
4.95e-23 9 423 31 454
Chain AAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]
9.97e-23 60 423 6 378
Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.83e-30 55 401 7 348
Choline oxidase OS=Arthrobacter globiformis OX=1665 GN=codA PE=1 SV=1
3.21e-27 62 423 2 362
Alcohol dehydrogenase [acceptor] OS=Pseudomonas putida OX=303 GN=alkJ PE=3 SV=1
4.02e-27 56 423 37 406
Choline dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Chdh PE=1 SV=1
5.38e-27 46 423 31 404
Choline dehydrogenase, mitochondrial OS=Homo sapiens OX=9606 GN=CHDH PE=1 SV=2
1.72e-26 62 374 5 304
L-sorbose 1-dehydrogenase OS=Gluconobacter oxydans OX=442 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.999957 0.000038

TMHMM  Annotations      help

There is no transmembrane helices in H257_17041-t26_2-p1.