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CAZyme Information: H257_13245-t26_1-p1

You are here: Home > Sequence: H257_13245-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aphanomyces astaci
Lineage Oomycota; NA; ; Saprolegniaceae; Aphanomyces; Aphanomyces astaci
CAZyme ID H257_13245-t26_1-p1
CAZy Family GT31
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
310 32653.51 7.3000
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AastaciAPO3 19584 N/A 465 19119
Gene Location Start: 1317; End:2249  Strand: +

Full Sequence      Download help

DINMKPTTSI  LLSALALSSV  VDFADAHGRM  LSPPHRGHIG  RLPKFSGLVP  INYSDNGLSA60
GGIGGTKGGK  HGVCGDAYSG  VREHETGGTY  GRFPIHGSKV  VGACYAPGST  VDLEIQLTAN120
HKGYFQFGLC  KLSGKDDKET  EECFKALAQP  SGETQWQVPP  GNQVFNMKYV  LPSGVTCDGD180
SHCVLRWHYV  GWNNYGVDIN  GQEQFWNCAD  VYISNTCGAS  NPTPSSAKPS  TSAVATQPPR240
PTQPQAPSTS  KPTIPTQPPQ  TSAPSNPTPA  PVPGQCGTCA  NCYYAPTNSC  YAGWSATQCA300
EVPGLKWCGA  310

Enzyme Prediction      help

EC 1.14.99.53:1

CAZyme Signature Domains help

Created with Snap1531466277931081241391551701862012172322482632792941193AA15
Family Start End Evalue family coverage
AA15 27 211 3.8e-53 0.9948186528497409

CDD Domains      download full data without filtering help

Created with Snap153146627793108124139155170186201217232248263279294105211LPMO_10224275PRK05641219271fibronec_FbpA214274rad23218274gliding_GltJ
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
397269 LPMO_10 1.14e-09 105 211 89 186
Lytic polysaccharide mono-oxygenase, cellulose-degrading. This domain is found associated with a wide variety of cellulose binding domains. This is a family of two very closely related proteins that together act as both a C1- and a C4-oxidising lytic polysaccharide mono-oxygenase, degrading cellulose. This domain is also found in baculoviral spheroidins and spindolins, protein of unknown function.
235540 PRK05641 6.71e-05 224 275 44 94
putative acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; Validated
411474 fibronec_FbpA 3.46e-04 219 271 183 240
LPXTG-anchored fibronectin-binding protein FbpA. FbpA, a fibronectin-binding protein described in Streptococcus pyogenes, has a YSIRK-type (crosswall-targeting) signal peptide and a C-terminal LPXTG motif for covalent attachment to the cell wall. It is unrelated to the PavA-like protein from Streptococcus gordonii (see BlastRule NBR009716) that was given the identical name, so the phase LPXTG-anchored is added to the protein name for clarity.
273167 rad23 3.94e-04 214 274 81 143
UV excision repair protein Rad23. All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
411345 gliding_GltJ 6.73e-04 218 274 424 479
adventurous gliding motility protein GltJ. Adventurous gliding motility protein GltJ, also known as AgmX, occurs in delta-proteobacteria such as Myxococcus xanthus.

CAZyme Hits      help

Created with Snap1531466277931081241391551701862012172322482632792941310ETV71343.1|AA158309ETV68872.1|AA154309ETV65578.1|AA154309ETV69628.1|AA154299ETV63929.1|AA15
Hit ID E-Value Query Start Query End Hit Start Hit End
ETV71343.1|AA15 3.00e-219 1 310 1 310
ETV68872.1|AA15 8.50e-170 8 309 4 305
ETV65578.1|AA15 1.48e-159 4 309 1 355
ETV69628.1|AA15 4.46e-132 4 309 1 308
ETV63929.1|AA15 1.12e-126 4 299 1 298

PDB Hits      download full data without filtering help

Created with Snap153146627793108124139155170186201217232248263279294272145MSZ_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5MSZ_A 2.47e-24 27 214 1 193
Lytic Polysaccharide Monooxygenase AA15 from Thermobia domestica in the Cu(I) State [Thermobia domestica]

Swiss-Prot Hits      help

H257_13245-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000239 0.999744 CS pos: 26-27. Pr: 0.9730

TMHMM  Annotations      help

There is no transmembrane helices in H257_13245-t26_1-p1.