logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: H257_11273-t26_1-p1

You are here: Home > Sequence: H257_11273-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aphanomyces astaci
Lineage Oomycota; NA; ; Saprolegniaceae; Aphanomyces; Aphanomyces astaci
CAZyme ID H257_11273-t26_1-p1
CAZy Family GT2
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
278 KI913146|CGC1 29907.49 8.4211
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AastaciAPO3 19584 N/A 465 19119
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in H257_11273-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 86 189 8.6e-25 0.4163265306122449

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
197593 fCBD 5.38e-08 244 276 2 34
Fungal-type cellulose-binding domain. Small four-cysteine cellulose-binding domain of fungi
395595 CBM_1 7.59e-07 245 272 2 29
Fungal cellulose binding domain.
197593 fCBD 4.32e-06 202 232 4 34
Fungal-type cellulose-binding domain. Small four-cysteine cellulose-binding domain of fungi
395595 CBM_1 0.001 202 228 3 29
Fungal cellulose binding domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
9.90e-69 16 235 33 260
2.61e-49 20 231 40 269
1.46e-48 20 231 40 269
3.60e-31 19 234 38 297
5.45e-30 20 232 38 261

PDB Hits      help

H257_11273-t26_1-p1 has no PDB hit.

Swiss-Prot Hits      help

H257_11273-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000032 0.000020

TMHMM  Annotations      help

There is no transmembrane helices in H257_11273-t26_1-p1.