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CAZyme Information: H257_11271-t26_1-p1

You are here: Home > Sequence: H257_11271-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aphanomyces astaci
Lineage Oomycota; NA; ; Saprolegniaceae; Aphanomyces; Aphanomyces astaci
CAZyme ID H257_11271-t26_1-p1
CAZy Family GT2
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
372 39275.85 6.7753
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AastaciAPO3 19584 N/A 465 19119
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in H257_11271-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 9 229 4.2e-71 0.8979591836734694

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
197593 fCBD 5.03e-08 294 327 1 34
Fungal-type cellulose-binding domain. Small four-cysteine cellulose-binding domain of fungi
197593 fCBD 6.81e-08 339 370 3 34
Fungal-type cellulose-binding domain. Small four-cysteine cellulose-binding domain of fungi
395595 CBM_1 6.31e-06 295 323 1 29
Fungal cellulose binding domain.
395595 CBM_1 1.86e-05 339 366 2 29
Fungal cellulose binding domain.
273167 rad23 1.84e-04 190 255 82 142
UV excision repair protein Rad23. All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.84e-230 1 338 1 338
1.49e-120 8 329 10 297
1.05e-70 19 331 20 261
6.56e-70 19 337 23 280
7.75e-70 15 327 18 323

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.40e-19 20 187 1 172
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

H257_11271-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000219 0.999746 CS pos: 19-20. Pr: 0.9810

TMHMM  Annotations      help

There is no transmembrane helices in H257_11271-t26_1-p1.