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CAZyme Information: H257_07411-t26_5-p1

You are here: Home > Sequence: H257_07411-t26_5-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aphanomyces astaci
Lineage Oomycota; NA; ; Saprolegniaceae; Aphanomyces; Aphanomyces astaci
CAZyme ID H257_07411-t26_5-p1
CAZy Family GH31
CAZyme Description hypothetical protein, variant 5
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
608 66051.90 8.6492
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AastaciAPO3 19584 N/A 465 19119
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in H257_07411-t26_5-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 36 544 3.9e-49 0.5161812297734628

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
366272 GMC_oxred_N 2.27e-58 90 298 5 218
GMC oxidoreductase. This family of proteins bind FAD as a cofactor.
225186 BetA 8.60e-39 56 538 25 536
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
398739 GMC_oxred_C 5.30e-22 388 529 13 141
GMC oxidoreductase. This domain found associated with pfam00732.
274888 Rv0697 1.59e-10 185 535 181 486
dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function.
235000 PRK02106 1.53e-06 230 528 219 524
choline dehydrogenase; Validated

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
4.93e-109 34 539 216 734
5.63e-10 25 538 1 529
2.82e-08 26 537 255 800
3.71e-08 215 544 208 538
4.39e-08 38 541 32 578

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
9.00e-06 231 535 233 504
Chain A, 6'''-hydroxyparomomycin C oxidase [Microbacterium trichothecenolyticum],7DVE_B Chain B, 6'''-hydroxyparomomycin C oxidase [Microbacterium trichothecenolyticum]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.34e-101 33 542 232 745
Long-chain-alcohol oxidase FAO4B OS=Arabidopsis thaliana OX=3702 GN=FAO4B PE=2 SV=2
6.59e-101 31 532 229 737
Long-chain-alcohol oxidase FAO1 OS=Lotus japonicus OX=34305 GN=FAO1 PE=1 SV=1
3.64e-100 18 539 209 746
Long-chain-alcohol oxidase FAO2 OS=Lotus japonicus OX=34305 GN=FAO2 PE=2 SV=1
4.09e-100 37 531 222 714
Long-chain-alcohol oxidase FAO4A OS=Arabidopsis thaliana OX=3702 GN=FAO4A PE=3 SV=2
9.49e-93 23 539 208 740
Long-chain-alcohol oxidase FAO3 OS=Arabidopsis thaliana OX=3702 GN=FAO3 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000038 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in H257_07411-t26_5-p1.