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CAZyme Information: GLOIN_2v1841920-t44_1-p1

You are here: Home > Sequence: GLOIN_2v1841920-t44_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Rhizophagus irregularis
Lineage Mucoromycota; Glomeromycetes; ; Glomeraceae; Rhizophagus; Rhizophagus irregularis
CAZyme ID GLOIN_2v1841920-t44_1-p1
CAZy Family GT4
CAZyme Description glycosyltransferase family 5 protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
691 AUPC02000125|CGC1 78872.09 9.3329
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_RirregularisDAOM181602 26245 747089 102 26143
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in GLOIN_2v1841920-t44_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT5 112 680 1.4e-40 0.9936440677966102

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
340822 GT5_Glycogen_synthase_DULL1-like 1.23e-19 112 589 2 398
Glycogen synthase GlgA and similar proteins. This family is most closely related to the GT5 family of glycosyltransferases. Glycogen synthase (EC:2.4.1.21) catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
223374 GlgA 2.32e-19 112 589 3 398
Glycogen synthase [Carbohydrate transport and metabolism].
400563 Glyco_transf_5 3.47e-14 112 321 1 166
Starch synthase catalytic domain.
234809 glgA 1.18e-11 128 589 20 386
glycogen synthase GlgA.
172588 PRK14098 2.42e-09 284 575 143 397
starch synthase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
4.30e-106 85 683 127 802
4.51e-102 47 682 63 719
3.32e-96 83 691 111 813
2.65e-18 112 683 191 715
6.99e-13 112 613 36 482

PDB Hits      help

GLOIN_2v1841920-t44_1-p1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.83e-09 254 679 114 485
Glycogen synthase 1 OS=Synechococcus sp. (strain JA-2-3B'a(2-13)) OX=321332 GN=glgA1 PE=3 SV=1
7.46e-09 253 689 128 493
Glycogen synthase OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) OX=289376 GN=glgA PE=3 SV=1
3.91e-08 254 679 114 485
Glycogen synthase 1 OS=Synechococcus sp. (strain JA-3-3Ab) OX=321327 GN=glgA1 PE=3 SV=1
2.07e-07 112 575 8 397
Glycogen synthase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) OX=324925 GN=glgA PE=3 SV=1
4.74e-07 254 679 111 481
Glycogen synthase 2 OS=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) OX=243233 GN=glgA2 PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.999973 0.000050

TMHMM  Annotations      download full data without filtering help

Start End
53 75