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CAZyme Information: GLOIN_2v1613438-t44_1-p1

You are here: Home > Sequence: GLOIN_2v1613438-t44_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Rhizophagus irregularis
Lineage Mucoromycota; Glomeromycetes; ; Glomeraceae; Rhizophagus; Rhizophagus irregularis
CAZyme ID GLOIN_2v1613438-t44_1-p1
CAZy Family GH5
CAZyme Description glycoside hydrolase family 5 protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
509 AUPC02000116|CGC1 57699.10 7.4618
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_RirregularisDAOM181602 26245 747089 102 26143
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in GLOIN_2v1613438-t44_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH5 56 387 5.3e-108 0.9969135802469136

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395098 Cellulase 1.22e-12 81 390 23 271
Cellulase (glycosyl hydrolase family 5).
408348 Glyco_hydro_5_C 1.63e-09 420 506 1 86
Glycoside hydrolase family 5 C-terminal domain. This is the C-terminal domain of endo-glycoceramidase II (EGC), a membrane-associated family 5 glycosidase pfam00150. The C-terminal domain assumes a beta-sandwich fold, which resembles that of many carbohydrate-binding modules.
225344 BglC 0.002 73 343 65 272
Aryl-phospho-beta-D-glucosidase BglC, GH1 family [Carbohydrate transport and metabolism].
396834 Glyco_hydro_42 0.002 84 138 13 65
Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
4.34e-113 48 509 42 503
1.37e-111 48 509 42 503
5.77e-108 38 482 13 462
2.60e-96 40 506 26 479
9.83e-95 48 509 15 465

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.10e-31 30 471 32 446
Chain A, Putative secreted endoglycosylceramidase [Rhodococcus hoagii 103S],5CCU_B Chain B, Putative secreted endoglycosylceramidase [Rhodococcus hoagii 103S]
1.28e-30 30 471 32 446
Chain A, Putative secreted endoglycosylceramidase [Rhodococcus hoagii 103S],5J14_B Chain B, Putative secreted endoglycosylceramidase [Rhodococcus hoagii 103S],5J7Z_A Chain A, Putative secreted endoglycosylceramidase [Rhodococcus hoagii 103S],5J7Z_B Chain B, Putative secreted endoglycosylceramidase [Rhodococcus hoagii 103S]
1.05e-19 49 308 34 277
Chain A, Putative secreted endoglycosylceramidase [Rhodococcus hoagii 103S]
2.36e-13 49 251 39 228
Endo-glycoceramidase II from Rhodococcus sp. [Rhodococcus sp.],2OSW_B Endo-glycoceramidase II from Rhodococcus sp. [Rhodococcus sp.],2OYK_A Endo-glycoceramidase II from Rhodococcus sp.: cellobiose-like isofagomine complex [Rhodococcus sp.],2OYK_B Endo-glycoceramidase II from Rhodococcus sp.: cellobiose-like isofagomine complex [Rhodococcus sp.],2OYL_A Endo-glycoceramidase II from Rhodococcus sp.: cellobiose-like imidazole complex [Rhodococcus sp.],2OYL_B Endo-glycoceramidase II from Rhodococcus sp.: cellobiose-like imidazole complex [Rhodococcus sp.],2OYM_A Endo-glycoceramidase II from Rhodococcus sp.: five-membered iminocyclitol complex [Rhodococcus sp.],2OYM_B Endo-glycoceramidase II from Rhodococcus sp.: five-membered iminocyclitol complex [Rhodococcus sp.]
2.36e-13 49 251 39 228
Chain A, Endoglycoceramidase II [Rhodococcus sp.]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.43e-112 48 509 42 503
Endoglycoceramidase OS=Cyanea nozakii OX=135523 PE=1 SV=1
1.03e-108 38 482 13 462
Endoglycoceramidase OS=Hydra vulgaris OX=6087 PE=1 SV=1
2.06e-29 46 471 42 438
Endoglycoceramidase I OS=Rhodococcus hoagii (strain 103S) OX=685727 GN=REQ_38260 PE=1 SV=1
1.10e-09 40 251 16 262
Glucosylceramidase OS=Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487) OX=235443 GN=EGC1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.005500 0.994440 CS pos: 23-24. Pr: 0.9588

TMHMM  Annotations      download full data without filtering help

Start End
7 24