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CAZyme Information: GLOIN_2v1481998-t44_1-p1

You are here: Home > Sequence: GLOIN_2v1481998-t44_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Rhizophagus irregularis
Lineage Mucoromycota; Glomeromycetes; ; Glomeraceae; Rhizophagus; Rhizophagus irregularis
CAZyme ID GLOIN_2v1481998-t44_1-p1
CAZy Family AA7
CAZyme Description glycoside hydrolase family 27 protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
435 AUPC02000182|CGC1 49230.91 4.7246
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_RirregularisDAOM181602 26245 747089 102 26143
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.22:58 2.4.1.-:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH27 130 365 4.6e-76 0.9781659388646288

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
166449 PLN02808 6.15e-143 24 387 22 384
alpha-galactosidase
269893 GH27 3.65e-141 34 300 1 271
glycosyl hydrolase family 27 (GH27). GH27 enzymes occur in eukaryotes, prokaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-N-acetylgalactosaminidase, and 3-alpha-isomalto-dextranase. All GH27 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. GH27 members are retaining enzymes that cleave their substrates via an acid/base-catalyzed, double-displacement mechanism involving a covalent glycosyl-enzyme intermediate. Two aspartic acid residues have been identified as the catalytic nucleophile and the acid/base, respectively.
177874 PLN02229 3.93e-140 26 364 55 394
alpha-galactosidase
178295 PLN02692 9.16e-137 24 363 46 384
alpha-galactosidase
374582 Melibiase_2 7.39e-99 33 300 1 284
Alpha galactosidase A.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
8.54e-133 21 387 27 395
1.09e-128 27 387 49 408
1.09e-128 27 387 49 408
2.01e-128 28 386 35 397
5.62e-128 28 387 44 407

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.89e-117 27 387 2 360
Chain A, alpha-galactosidase [Oryza sativa]
4.50e-114 26 387 1 361
Nicotiana benthamiana alpha-galactosidase [Nicotiana benthamiana]
9.78e-97 27 386 2 390
Crystal structure of alpha-galactosidase I from Mortierella vinacea [Umbelopsis vinacea]
7.26e-87 28 341 24 370
Chain A, Alpha-galactosidase 1 [Saccharomyces cerevisiae],3LRL_A Chain A, Alpha-galactosidase 1 [Saccharomyces cerevisiae]
9.57e-86 33 343 99 430
Crystal structure of a putative alpha-galactosidase/melibiase (BF4189) from Bacteroides fragilis NCTC 9343 at 2.00 A resolution [Bacteroides fragilis NCTC 9343],4OGZ_B Crystal structure of a putative alpha-galactosidase/melibiase (BF4189) from Bacteroides fragilis NCTC 9343 at 2.00 A resolution [Bacteroides fragilis NCTC 9343]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.93e-129 27 387 49 408
Alpha-galactosidase OS=Cyamopsis tetragonoloba OX=3832 PE=1 SV=1
6.19e-124 26 390 65 431
Alpha-galactosidase 3 OS=Arabidopsis thaliana OX=3702 GN=AGAL3 PE=1 SV=1
2.41e-121 26 387 32 392
Alpha-galactosidase 2 OS=Arabidopsis thaliana OX=3702 GN=AGAL2 PE=1 SV=1
8.69e-120 26 385 46 407
Alpha-galactosidase 1 OS=Arabidopsis thaliana OX=3702 GN=AGAL1 PE=2 SV=1
1.82e-115 27 387 57 415
Alpha-galactosidase OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0493600 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000187 0.999812 CS pos: 25-26. Pr: 0.9759

TMHMM  Annotations      download full data without filtering help

Start End
411 433