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CAZyme Information: GAQ12137.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Aspergillus lentulus | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus lentulus | |||||||||||
| CAZyme ID | GAQ12137.1 | |||||||||||
| CAZy Family | GT50 | |||||||||||
| CAZyme Description | probable endopolygalacturonase B | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.15:80 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 42 | 359 | 2.4e-72 | 0.9784615384615385 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 4.50e-139 | 47 | 364 | 1 | 321 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 215426 | PLN02793 | 1.61e-26 | 25 | 335 | 57 | 382 | Probable polygalacturonase |
| 227721 | Pgu1 | 6.91e-23 | 25 | 334 | 87 | 455 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| 215540 | PLN03010 | 1.82e-22 | 85 | 363 | 122 | 394 | polygalacturonase |
| 177865 | PLN02218 | 9.96e-21 | 25 | 358 | 72 | 420 | polygalacturonase ADPG |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 2.21e-246 | 1 | 364 | 21 | 402 | |
| 1.62e-211 | 1 | 364 | 1 | 363 | |
| 3.66e-210 | 1 | 364 | 1 | 360 | |
| 3.66e-210 | 1 | 364 | 1 | 360 | |
| 7.37e-210 | 1 | 364 | 1 | 360 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7.54e-162 | 26 | 364 | 5 | 344 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 4.34e-161 | 26 | 364 | 5 | 344 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
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| 8.82e-159 | 31 | 364 | 2 | 336 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 7.58e-156 | 31 | 362 | 2 | 335 | Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_B Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_C Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_D Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_E Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_F Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_G Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini] |
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| 1.23e-150 | 1 | 364 | 1 | 362 | Endo-Polygalacturonase Ii From Aspergillus Niger [Aspergillus niger],1CZF_B Endo-Polygalacturonase Ii From Aspergillus Niger [Aspergillus niger] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4.42e-253 | 1 | 364 | 1 | 364 | Probable endopolygalacturonase B OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pgaB PE=3 SV=1 |
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| 8.91e-253 | 1 | 364 | 1 | 364 | Probable endopolygalacturonase B OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pgaB PE=3 SV=1 |
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| 3.63e-252 | 1 | 364 | 1 | 364 | Probable endopolygalacturonase B OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pgaB PE=3 SV=1 |
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| 6.50e-211 | 1 | 364 | 1 | 360 | Probable endopolygalacturonase B OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pgaB PE=3 SV=1 |
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| 6.50e-211 | 1 | 364 | 1 | 360 | Endopolygalacturonase B OS=Aspergillus niger OX=5061 GN=pgaB PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000253 | 0.999721 | CS pos: 29-30. Pr: 0.6027 |