You are browsing environment: FUNGIDB
CAZyme Information: GAQ09510.1
You are here: Home > Sequence: GAQ09510.1
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Aspergillus lentulus | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus lentulus | |||||||||||
| CAZyme ID | GAQ09510.1 | |||||||||||
| CAZy Family | GH5 | |||||||||||
| CAZyme Description | probable pectin lyase F | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 4.2.2.10:3 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 109 | 298 | 1.1e-86 | 0.9893048128342246 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 214765 | Amb_all | 7.32e-42 | 107 | 300 | 2 | 190 | Amb_all domain. |
| 226384 | PelB | 8.03e-19 | 114 | 386 | 92 | 344 | Pectate lyase [Carbohydrate transport and metabolism]. |
| 366158 | Pec_lyase_C | 2.03e-18 | 112 | 296 | 23 | 211 | Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. |
| 404168 | Beta_helix | 0.002 | 136 | 294 | 21 | 156 | Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 3.06e-210 | 7 | 385 | 11 | 390 | |
| 1.77e-209 | 7 | 385 | 11 | 390 | |
| 1.77e-209 | 7 | 385 | 11 | 390 | |
| 1.77e-209 | 7 | 385 | 11 | 390 | |
| 1.45e-207 | 1 | 386 | 1 | 387 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6.92e-94 | 16 | 385 | 1 | 359 | Pectin Lyase B [Aspergillus niger] |
|
| 4.52e-89 | 18 | 385 | 3 | 358 | Pectin Lyase A [Aspergillus niger] |
|
| 2.55e-88 | 18 | 385 | 3 | 358 | Pectin Lyase A [Aspergillus niger],1IDJ_B Pectin Lyase A [Aspergillus niger] |
|
| 1.95e-12 | 124 | 299 | 80 | 249 | Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 [Bacillus sp. N16-5],3VMW_A Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 in complex with trigalacturonate [Bacillus sp. N16-5] |
|
| 3.33e-08 | 103 | 296 | 60 | 276 | Chain A, PECTATE LYASE E [Dickeya chrysanthemi] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 9.13e-289 | 1 | 386 | 1 | 386 | Probable pectin lyase F OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pelF PE=3 SV=1 |
|
| 2.69e-281 | 1 | 385 | 1 | 385 | Probable pectin lyase E OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pelE PE=3 SV=1 |
|
| 7.24e-220 | 1 | 385 | 1 | 387 | Probable pectin lyase F-1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pelF-1 PE=3 SV=1 |
|
| 3.88e-114 | 9 | 385 | 13 | 379 | Probable pectin lyase F-2 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pelF-2 PE=3 SV=1 |
|
| 4.51e-109 | 12 | 385 | 18 | 382 | Probable pectin lyase F OS=Aspergillus niger OX=5061 GN=pelF PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000248 | 0.999734 | CS pos: 20-21. Pr: 0.9474 |