You are browsing environment: FUNGIDB
CAZyme Information: FVEG_13711-t26_1-p1
You are here: Home > Sequence: FVEG_13711-t26_1-p1
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Fusarium verticillioides | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium verticillioides | |||||||||||
| CAZyme ID | FVEG_13711-t26_1-p1 | |||||||||||
| CAZy Family | GT3 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 4.2.2.10:25 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 114 | 208 | 7.7e-46 | 0.5026737967914439 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 214765 | Amb_all | 1.01e-46 | 113 | 266 | 1 | 190 | Amb_all domain. |
| 226384 | PelB | 2.54e-15 | 112 | 264 | 85 | 275 | Pectate lyase [Carbohydrate transport and metabolism]. |
| 366158 | Pec_lyase_C | 1.20e-09 | 117 | 262 | 23 | 211 | Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 3.79e-222 | 1 | 344 | 1 | 377 | |
| 3.79e-222 | 1 | 344 | 1 | 377 | |
| 3.79e-222 | 1 | 344 | 1 | 377 | |
| 3.11e-221 | 1 | 344 | 1 | 377 | |
| 4.74e-209 | 1 | 344 | 1 | 377 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5.75e-121 | 21 | 322 | 1 | 336 | Pectin Lyase B [Aspergillus niger] |
|
| 3.61e-104 | 22 | 322 | 2 | 335 | Pectin Lyase A [Aspergillus niger] |
|
| 2.91e-103 | 22 | 322 | 2 | 335 | Pectin Lyase A [Aspergillus niger],1IDJ_B Pectin Lyase A [Aspergillus niger] |
|
| 3.44e-09 | 117 | 192 | 69 | 153 | Chain A, PECTATE LYASE E [Dickeya chrysanthemi] |
|
| 9.46e-07 | 124 | 202 | 128 | 219 | Structure of the thermostable pectate lyase PL 47 [Bacillus sp. TS-47] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6.64e-124 | 6 | 322 | 6 | 356 | Probable pectin lyase B OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pelB PE=3 SV=1 |
|
| 2.77e-123 | 1 | 322 | 1 | 356 | Probable pectin lyase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pelA PE=3 SV=1 |
|
| 6.87e-121 | 6 | 322 | 6 | 355 | Pectin lyase B OS=Aspergillus niger OX=5061 GN=pelB PE=1 SV=1 |
|
| 1.33e-118 | 1 | 344 | 1 | 379 | Pectin lyase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pelA PE=1 SV=2 |
|
| 1.33e-118 | 13 | 322 | 12 | 355 | Pectin lyase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pelB PE=2 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000217 | 0.999756 | CS pos: 20-21. Pr: 0.9787 |