logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: FVEG_13656-t26_1-p1

You are here: Home > Sequence: FVEG_13656-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fusarium verticillioides
Lineage Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium verticillioides
CAZyme ID FVEG_13656-t26_1-p1
CAZy Family GT2|GT2
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
635 CM000587.1|CGC8 69714.00 5.9052
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Fverticillioides7600 16240 334819 371 15869
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in FVEG_13656-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 23 630 1.3e-91 0.9929577464788732

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
225186 BetA 4.82e-51 37 634 21 538
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
235000 PRK02106 7.09e-49 266 630 206 532
choline dehydrogenase; Validated
398739 GMC_oxred_C 2.86e-30 494 625 5 143
GMC oxidoreductase. This domain found associated with pfam00732.
215420 PLN02785 6.37e-19 284 631 235 578
Protein HOTHEAD
366272 GMC_oxred_N 5.05e-17 119 389 19 218
GMC oxidoreductase. This family of proteins bind FAD as a cofactor.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 635 1 640
0.0 1 635 1 640
0.0 1 635 1 640
0.0 1 635 1 640
0.0 1 635 1 640

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.88e-35 22 629 6 560
Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis]
3.89e-35 22 629 6 560
Chain A, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis],6ZH7_B Chain B, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]
3.89e-35 22 629 6 560
Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis]
3.89e-35 22 629 6 560
Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRV_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRX_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRZ_AAA Chain AAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]
3.93e-35 22 629 82 636
Chain AAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
9.35e-45 22 635 5 537
Oxygen-dependent choline dehydrogenase OS=Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000) OX=223283 GN=betA PE=3 SV=1
1.57e-43 22 635 5 537
Oxygen-dependent choline dehydrogenase OS=Pseudomonas syringae pv. syringae (strain B728a) OX=205918 GN=betA PE=3 SV=1
3.95e-43 22 635 3 535
Oxygen-dependent choline dehydrogenase OS=Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5) OX=220664 GN=betA PE=3 SV=1
1.37e-42 22 635 3 535
Oxygen-dependent choline dehydrogenase OS=Pseudomonas fluorescens (strain SBW25) OX=216595 GN=betA PE=3 SV=1
1.82e-42 22 624 3 528
Oxygen-dependent choline dehydrogenase OS=Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) OX=160488 GN=betA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000458 0.999483 CS pos: 15-16. Pr: 0.9834

TMHMM  Annotations      help

There is no transmembrane helices in FVEG_13656-t26_1-p1.