logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: FVEG_11228-t26_1-p1

You are here: Home > Sequence: FVEG_11228-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fusarium verticillioides
Lineage Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium verticillioides
CAZyme ID FVEG_11228-t26_1-p1
CAZy Family GH47
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
2589 CM000586.1|CGC9 269271.99 4.6086
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Fverticillioides7600 16240 334819 371 15869
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC - - - - -

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 1125 1421 1.8e-69 0.9826388888888888
CE8 1472 1758 6.1e-62 0.9409722222222222
CE8 1829 2117 7.7e-62 0.96875
CE8 791 1064 2.9e-46 0.9166666666666666
CE8 371 641 9.5e-25 0.9270833333333334

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395871 Pectinesterase 1.47e-43 1125 1422 3 296
Pectinesterase.
178051 PLN02432 4.91e-39 1134 1427 22 292
putative pectinesterase
178372 PLN02773 1.10e-37 1124 1421 7 296
pectinesterase
215357 PLN02665 5.83e-36 1829 2111 75 348
pectinesterase family protein
215367 PLN02682 2.29e-35 1122 1427 69 367
pectinesterase family protein

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 2589 1 2587
0.0 1 2589 1 2587
0.0 1 2589 1 2587
0.0 1 2589 1 2562
0.0 1 2589 1 2622

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.16e-38 1135 1428 19 296
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
2.13e-38 1135 1428 19 296
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
1.07e-26 1117 1427 2 308
Pectin methylesterase from Carrot [Daucus carota]
1.29e-24 1122 1427 3 304
Chain A, Pectinesterase 1 [Solanum lycopersicum]
5.31e-14 782 1025 7 278
Chain A, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.74e-47 1116 1433 12 331
Pectinesterase OS=Aspergillus niger OX=5061 GN=pme1 PE=1 SV=1
5.88e-46 1116 1428 12 327
Pectinesterase OS=Aspergillus aculeatus OX=5053 GN=pme1 PE=2 SV=1
3.93e-39 1462 1789 29 324
Probable pectinesterase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pmeA PE=3 SV=1
9.81e-39 1462 1789 29 324
Probable pectinesterase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pmeA PE=3 SV=1
1.06e-38 1116 1428 14 324
Probable pectinesterase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pmeA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000232 0.999745 CS pos: 19-20. Pr: 0.9759

TMHMM  Annotations      help

There is no transmembrane helices in FVEG_11228-t26_1-p1.