logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: FVEG_10958-t26_1-p1

You are here: Home > Sequence: FVEG_10958-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fusarium verticillioides
Lineage Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium verticillioides
CAZyme ID FVEG_10958-t26_1-p1
CAZy Family GH45
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
549 59641.39 5.6427
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Fverticillioides7600 16240 334819 371 15869
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in FVEG_10958-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 5 546 6.5e-134 0.9929577464788732

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
235000 PRK02106 9.98e-93 1 547 1 533
choline dehydrogenase; Validated
225186 BetA 2.12e-82 1 545 3 533
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
274888 Rv0697 1.92e-47 7 545 2 486
dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function.
398739 GMC_oxred_C 1.91e-36 402 541 1 143
GMC oxidoreductase. This domain found associated with pfam00732.
215420 PLN02785 1.33e-27 5 522 55 553
Protein HOTHEAD

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 549 1 549
0.0 1 549 1 549
0.0 1 549 1 549
0.0 1 549 1 549
0.0 1 549 1 549

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.74e-62 1 548 3 563
Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRV_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRX_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRZ_AAA Chain AAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]
1.74e-62 1 548 3 563
Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis]
1.74e-62 1 548 3 563
Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis]
2.38e-62 1 548 19 579
Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_B Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_C Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_D Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_E Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_F Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis]
3.67e-62 1 548 79 639
Chain AAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.32e-89 3 548 2 521
GMC-type oxidoreductase acuG OS=Aspergillus aculeatus (strain ATCC 16872 / CBS 172.66 / WB 5094) OX=690307 GN=acuG PE=3 SV=1
4.76e-66 6 548 5 536
Oxygen-dependent choline dehydrogenase OS=Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5) OX=220664 GN=betA PE=3 SV=1
1.14e-65 1 548 1 535
Oxygen-dependent choline dehydrogenase OS=Paraburkholderia xenovorans (strain LB400) OX=266265 GN=betA PE=3 SV=1
9.48e-65 6 547 3 533
Oxygen-dependent choline dehydrogenase OS=Yersinia pseudotuberculosis serotype I (strain IP32953) OX=273123 GN=betA PE=3 SV=1
9.48e-65 6 547 3 533
Oxygen-dependent choline dehydrogenase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) OX=502801 GN=betA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.999992 0.000052

TMHMM  Annotations      help

There is no transmembrane helices in FVEG_10958-t26_1-p1.