logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: FVEG_05801-t26_1-p1

You are here: Home > Sequence: FVEG_05801-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fusarium verticillioides
Lineage Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium verticillioides
CAZyme ID FVEG_05801-t26_1-p1
CAZy Family GH114
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
420 CM000579.1|CGC11 45944.73 6.5984
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Fverticillioides7600 16240 334819 371 15869
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.67:7 3.2.1.-:2

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 83 411 1.7e-62 0.8615384615384616

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395231 Glyco_hydro_28 9.48e-30 144 407 43 290
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
178580 PLN03003 1.81e-21 140 396 99 335
Probable polygalacturonase At3g15720
215426 PLN02793 5.34e-21 47 395 43 371
Probable polygalacturonase
215120 PLN02188 2.87e-18 228 406 193 359
polygalacturonase/glycoside hydrolase family protein
215540 PLN03010 1.44e-17 149 407 138 360
polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.97e-295 1 409 1 407
3.16e-295 1 409 1 407
5.57e-295 1 409 1 407
6.99e-295 1 409 1 407
6.99e-295 1 409 1 407

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.16e-60 58 412 19 352
Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis]
1.50e-17 142 409 66 311
Endopolygalacturonase from the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides]
6.49e-16 86 392 6 292
Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_B Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_C Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_D Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_E Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_F Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger]
3.09e-15 142 407 73 318
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
4.16e-15 142 407 73 318
Chain A, endo-polygalacturonase [Evansstolkia leycettana]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.36e-137 39 409 34 396
Probable exopolygalacturonase X OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pgaX PE=3 SV=1
5.07e-136 47 409 40 396
Probable exopolygalacturonase X OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pgaX PE=3 SV=2
5.07e-136 47 409 40 396
Probable exopolygalacturonase X OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pgaX PE=3 SV=2
2.89e-135 47 409 40 396
Probable exopolygalacturonase X OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pgaX PE=3 SV=2
7.10e-134 6 409 7 396
Exopolygalacturonase X-1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pgaX-1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.272127 0.727862 CS pos: 21-22. Pr: 0.6981

TMHMM  Annotations      help

There is no transmembrane helices in FVEG_05801-t26_1-p1.