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CAZyme Information: FUN_007824-T1-p1

You are here: Home > Sequence: FUN_007824-T1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Rhizophagus irregularis
Lineage Mucoromycota; Glomeromycetes; ; Glomeraceae; Rhizophagus; Rhizophagus irregularis
CAZyme ID FUN_007824-T1-p1
CAZy Family GH13
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
250 29888.24 8.0685
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_RirregularisC2 25634 N/A 90 25544
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in FUN_007824-T1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT31 34 135 1.1e-16 0.4791666666666667

CDD Domains      help

FUN_007824-T1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
4.38e-20 45 210 432 619
8.04e-20 45 210 429 616
4.75e-18 44 234 102 294
1.13e-17 45 234 168 358
6.16e-17 35 237 99 308

PDB Hits      help

FUN_007824-T1-p1 has no PDB hit.

Swiss-Prot Hits      help

FUN_007824-T1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000037 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in FUN_007824-T1-p1.