dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: FUN_003602-T1-p1

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Basic Information help

Species

Rhizophagus irregularis

Lineage

Mucoromycota; Glomeromycetes; ; Glomeraceae; Rhizophagus; Rhizophagus irregularis

CAZyme ID

FUN_003602-T1-p1

CAZy Family

AA5

CAZyme Description

unspecified product

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
423	CP080898\|CGC1	47602.38	6.9622

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_RirregularisC2	25634	N/A	90	25544

Gene Location

Full Sequence Download help

Enzyme Prediction help

No EC number prediction in FUN_003602-T1-p1.

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
GH5	1	301	3.8e-98	0.9104938271604939

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
395098	Cellulase	2.33e-12	8	304	37	271	Cellulase (glycosyl hydrolase family 5).
408348	Glyco_hydro_5_C	7.07e-10	334	420	1	86	Glycoside hydrolase family 5 C-terminal domain. This is the C-terminal domain of endo-glycoceramidase II (EGC), a membrane-associated family 5 glycosidase pfam00150. The C-terminal domain assumes a beta-sandwich fold, which resembles that of many carbohydrate-binding modules.

CAZyme Hits help

Hit ID	E-Value	Query Start	Query End	Hit Start
7.14e-99	1	423	80	503
2.24e-97	1	423	80	503
4.58e-94	1	396	71	462
6.59e-85	2	420	74	479
1.32e-82	6	423	59	465

PDB Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
5.92e-24	3	385	87	446	Chain A, Putative secreted endoglycosylceramidase [Rhodococcus hoagii 103S],5CCU_B Chain B, Putative secreted endoglycosylceramidase [Rhodococcus hoagii 103S]
1.46e-23	3	385	87	446	Chain A, Putative secreted endoglycosylceramidase [Rhodococcus hoagii 103S],5J14_B Chain B, Putative secreted endoglycosylceramidase [Rhodococcus hoagii 103S],5J7Z_A Chain A, Putative secreted endoglycosylceramidase [Rhodococcus hoagii 103S],5J7Z_B Chain B, Putative secreted endoglycosylceramidase [Rhodococcus hoagii 103S]
1.37e-18	4	222	74	277	Chain A, Putative secreted endoglycosylceramidase [Rhodococcus hoagii 103S]
3.40e-11	5	165	76	228	Endo-glycoceramidase II from Rhodococcus sp. [Rhodococcus sp.],2OSW_B Endo-glycoceramidase II from Rhodococcus sp. [Rhodococcus sp.],2OYK_A Endo-glycoceramidase II from Rhodococcus sp.: cellobiose-like isofagomine complex [Rhodococcus sp.],2OYK_B Endo-glycoceramidase II from Rhodococcus sp.: cellobiose-like isofagomine complex [Rhodococcus sp.],2OYL_A Endo-glycoceramidase II from Rhodococcus sp.: cellobiose-like imidazole complex [Rhodococcus sp.],2OYL_B Endo-glycoceramidase II from Rhodococcus sp.: cellobiose-like imidazole complex [Rhodococcus sp.],2OYM_A Endo-glycoceramidase II from Rhodococcus sp.: five-membered iminocyclitol complex [Rhodococcus sp.],2OYM_B Endo-glycoceramidase II from Rhodococcus sp.: five-membered iminocyclitol complex [Rhodococcus sp.]
3.40e-11	5	165	76	228	Chain A, Endoglycoceramidase II [Rhodococcus sp.]

Swiss-Prot Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
3.98e-98	1	423	80	503	Endoglycoceramidase OS=Cyanea nozakii OX=135523 PE=1 SV=1
8.14e-95	1	396	71	462	Endoglycoceramidase OS=Hydra vulgaris OX=6087 PE=1 SV=1
2.90e-23	3	385	79	438	Endoglycoceramidase I OS=Rhodococcus hoagii (strain 103S) OX=685727 GN=REQ_38260 PE=1 SV=1
6.46e-08	4	165	77	262	Glucosylceramidase OS=Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487) OX=235443 GN=EGC1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
1.000060	0.000010

TMHMM Annotations help

There is no transmembrane helices in FUN_003602-T1-p1.