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CAZyme Information: FPRO_14370-t41_1-p1

You are here: Home > Sequence: FPRO_14370-t41_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fusarium proliferatum
Lineage Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium proliferatum
CAZyme ID FPRO_14370-t41_1-p1
CAZy Family GT1
CAZyme Description related to exopolygalacturonase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
402 FJOF01000008|CGC12 43240.71 7.6792
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_FproliferatumET1 16509 1227346 366 16143
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.-:3

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 55 393 9.8e-59 0.9692307692307692

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
177865 PLN02218 1.93e-31 40 354 77 389
polygalacturonase ADPG
395231 Glyco_hydro_28 1.04e-29 57 350 1 280
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
215120 PLN02188 2.71e-29 2 396 5 396
polygalacturonase/glycoside hydrolase family protein
178580 PLN03003 2.64e-26 38 352 31 336
Probable polygalacturonase At3g15720
215540 PLN03010 6.06e-26 40 354 56 355
polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
9.97e-285 1 401 1 401
2.50e-279 1 402 1 406
2.62e-254 1 394 1 394
2.62e-254 1 394 1 394
2.62e-254 1 394 1 394

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.16e-125 29 401 14 384
Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis]
9.43e-25 30 399 7 344
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
1.29e-24 30 399 7 344
Chain A, endo-polygalacturonase [Evansstolkia leycettana]
1.28e-22 32 399 1 336
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
6.56e-17 128 306 107 277
Endo-Polygalacturonase Ii From Aspergillus Niger [Aspergillus niger],1CZF_B Endo-Polygalacturonase Ii From Aspergillus Niger [Aspergillus niger]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.01e-124 29 401 32 402
Endo-xylogalacturonan hydrolase A OS=Aspergillus tubingensis OX=5068 GN=xghA PE=1 SV=1
8.09e-124 29 401 32 402
Probable endo-xylogalacturonan hydrolase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=xghA PE=3 SV=1
1.04e-122 9 378 6 374
Probable endo-xylogalacturonan hydrolase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=xghA PE=3 SV=1
1.31e-122 4 401 5 402
Probable endo-xylogalacturonan hydrolase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=xghA PE=3 SV=1
3.72e-122 4 401 5 402
Probable endo-xylogalacturonan hydrolase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=xghA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000241 0.999724 CS pos: 21-22. Pr: 0.9810

TMHMM  Annotations      help

There is no transmembrane helices in FPRO_14370-t41_1-p1.