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CAZyme Information: FPRO_12514-t41_1-p1

You are here: Home > Sequence: FPRO_12514-t41_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fusarium proliferatum
Lineage Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium proliferatum
CAZyme ID FPRO_12514-t41_1-p1
CAZy Family GH43|CBM91
CAZyme Description probable PGU1-Endo-polygalacturonase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
374 FJOF01000015|CGC7 38784.95 6.5820
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_FproliferatumET1 16509 1227346 366 16143
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.15:14 3.1.1.11:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 40 365 5.4e-70 0.96

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395231 Glyco_hydro_28 1.35e-139 43 372 1 319
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
215426 PLN02793 1.13e-25 42 348 79 386
Probable polygalacturonase
227721 Pgu1 5.55e-24 82 370 185 467
Polygalacturonase [Carbohydrate transport and metabolism].
177865 PLN02218 1.61e-23 96 365 158 415
polygalacturonase ADPG
178580 PLN03003 3.04e-16 85 332 111 333
Probable polygalacturonase At3g15720

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
6.82e-271 1 374 1 374
9.69e-271 1 374 1 374
7.96e-270 1 374 1 374
7.96e-270 1 374 1 374
7.96e-270 1 374 1 374

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.41e-232 26 374 1 349
Endopolygalacturonase from the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides]
3.35e-97 28 365 3 328
Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_B Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_C Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_D Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_E Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_F Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_G Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini]
2.63e-92 20 365 3 335
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
2.63e-92 20 365 3 335
Chain A, endo-polygalacturonase [Evansstolkia leycettana]
4.20e-89 28 365 3 327
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.10e-240 1 374 1 373
Polygalacturonase OS=Gibberella fujikuroi OX=5127 GN=PGA PE=1 SV=1
3.64e-156 28 373 173 514
Probable endopolygalacturonase D OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pgaD PE=3 SV=1
1.69e-154 28 372 129 469
Probable endopolygalacturonase D OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pgaD PE=3 SV=1
2.22e-150 28 373 154 495
Probable endopolygalacturonase D OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pgaD PE=3 SV=1
2.22e-150 28 373 154 495
Endopolygalacturonase D OS=Aspergillus niger OX=5061 GN=pgaD PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000252 0.999728 CS pos: 25-26. Pr: 0.9404

TMHMM  Annotations      help

There is no transmembrane helices in FPRO_12514-t41_1-p1.