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CAZyme Information: FPRN_13747-t42_1-p1

You are here: Home > Sequence: FPRN_13747-t42_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fusarium proliferatum
Lineage Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium proliferatum
CAZyme ID FPRN_13747-t42_1-p1
CAZy Family GT15
CAZyme Description related to exopolygalacturonase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
252 FCQG01000024|CGC5 27092.35 5.6022
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_FproliferatumNRRL62905 15602 N/A 348 15254
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.-:3

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 2 243 2e-44 0.6892307692307692

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395231 Glyco_hydro_28 2.51e-21 2 242 88 317
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
178580 PLN03003 7.32e-19 53 202 187 336
Probable polygalacturonase At3g15720
215120 PLN02188 8.57e-19 44 246 196 396
polygalacturonase/glycoside hydrolase family protein
177865 PLN02218 5.09e-18 7 204 200 389
polygalacturonase ADPG
215540 PLN03010 1.62e-15 22 204 171 355
polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.82e-176 1 251 150 401
8.49e-176 1 252 154 406
2.32e-148 1 227 150 377
2.32e-148 1 227 150 377
2.32e-148 1 227 150 377

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
9.29e-75 4 251 138 384
Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis]
3.74e-15 12 244 121 342
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
3.74e-15 12 244 121 342
Chain A, endo-polygalacturonase [Evansstolkia leycettana]
1.23e-14 12 244 113 334
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
3.29e-12 53 158 165 266
Endopolygalacturonase from the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.25e-74 4 228 150 374
Probable endo-xylogalacturonan hydrolase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=xghA PE=3 SV=1
7.87e-74 4 251 156 402
Endo-xylogalacturonan hydrolase A OS=Aspergillus tubingensis OX=5068 GN=xghA PE=1 SV=1
1.25e-72 4 251 156 402
Probable endo-xylogalacturonan hydrolase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=xghA PE=3 SV=1
3.52e-72 4 251 156 402
Probable endo-xylogalacturonan hydrolase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=xghA PE=3 SV=1
3.52e-72 4 251 156 402
Probable endo-xylogalacturonan hydrolase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=xghA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.999214 0.000816

TMHMM  Annotations      help

There is no transmembrane helices in FPRN_13747-t42_1-p1.