CAZyme Information: FPRN_13183-t42_1-p1

Basic Information

• Species: Fusarium proliferatum
• Lineage: Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium proliferatum
• CAZyme ID: FPRN_13183-t42_1-p1
• CAZy Family: GT8
• CAZyme Description: uncharacterized protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
599	FCQG01000026|CGC2	65283.89	8.1704

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_FproliferatumNRRL62905	15602	N/A	348	15254

• Gene Location: location=FCQG01000026:457471-459320(+)

Full Sequence      

MQLPNLFVHGLLAVGVTASRGRRLRRQDGQVDPGEPSDCTWWETKEEDYQDCTYLEEGWN
LKHSQFVEYNPSVKEDCSGMQFGHSYCVEVNNGIPRKGETTTSQAAEPEPTKDSKPSPTQ
DGLIDTCTSFYQAKKGDTCAKIVSDYKTFDFDDFYKWNPAVGKDCSGIWANTWYCVGVPG
TPTSPATRTAESSTKPTGPTKPTATQEGIIDSCTSFHQAAKGETCAKIVANYGTFDFDAF
FKWNPAVGKDCSGIWANYYYCVGVPGTPAVKPSATLPKPTATGGVETPSPIQEGIAKNCN
KFHQVVKTTTCSSIESYYKLPLAQFLAWNPAVGKDCSGLWANYWVCISVEGYKPATTTTA
KPTATRPANGIETPSPIQDGMVKNCEKFHQIKSTTTCTSIENYYNLPLSTFLSWNPAVGK
DCTALLTNYWVCVATVGWKPPTKTTTKPAATTTKSPNGISTPPPIQNGMVSNCNKFHMVT
KTTTCDSIQNYYKISMQDFAKWNPAVGSKCTGLWANYNVCVGVIGGTPTKPSTGVKTPSP
IQSGMVSNCKKFHPVASTTTCDSIQKYYKITMAQLVKWNPAIGAKCTGLWAKYYVCVGV

Enzyme Prediction     

No EC number prediction in FPRN_13183-t42_1-p1.

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
212030	LysM	8.17e-06	216	260	2	45	Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.
212030	LysM	1.58e-05	301	345	1	45	Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.
197609	LysM	8.42e-04	476	521	1	44	Lysin motif.
197609	LysM	0.006	302	347	1	44	Lysin motif.
197609	LysM	0.007	130	176	1	44	Lysin motif.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QKD61254.1|CBM50	0.0	1	599	1	599
QKD59082.1|CBM50	0.0	1	599	1	599
QGI87027.1|CBM50	0.0	1	599	1	661
QGI69682.1|CBM50	0.0	1	599	1	686
QGJ00570.1|CBM50	0.0	1	599	1	686

PDB Hits     

FPRN_13183-t42_1-p1 has no PDB hit.

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|D4ALG0|LYSM1_ARTBC	9.77e-112	244	598	98	456	LysM domain-containing protein ARB_05157 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_05157 PE=1 SV=1
sp|D4B4P8|LYSM2_ARTBC	2.51e-18	52	182	41	185	LysM domain-containing protein ARB_03438 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_03438 PE=3 SV=1
sp|D4AZ68|LYSM3_ARTBC	1.68e-13	473	599	268	408	LysM domain-containing protein ARB_01488 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_01488 PE=3 SV=1
sp|D4AVW3|LYSM5_ARTBC	8.49e-13	213	430	262	527	LysM domain-containing protein ARB_00327 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_00327 PE=3 SV=2
sp|D4B5F9|PGDA_ARTBC	3.24e-11	527	599	351	437	Probable peptidoglycan-N-acetylglucosamine deacetylase ARB_03699 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_03699 PE=1 SV=2

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
0.964687	0.035354

TMHMM  Annotations     

There is no transmembrane helices in FPRN_13183-t42_1-p1.