logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: FPRN_12357-t42_1-p1

You are here: Home > Sequence: FPRN_12357-t42_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fusarium proliferatum
Lineage Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium proliferatum
CAZyme ID FPRN_12357-t42_1-p1
CAZy Family GH5
CAZyme Description related to pectinesterase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
2622 272078.55 4.6602
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_FproliferatumNRRL62905 15602 N/A 348 15254
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC - - - - -

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 1158 1454 2.2e-69 0.9826388888888888
CE8 1863 2150 1.3e-63 0.96875
CE8 1506 1793 4.5e-61 0.9444444444444444
CE8 823 1096 3e-50 0.9166666666666666
CE8 408 673 5.2e-25 0.9270833333333334

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395871 Pectinesterase 3.74e-43 1158 1455 3 296
Pectinesterase.
178051 PLN02432 1.28e-38 1167 1460 22 292
putative pectinesterase
178372 PLN02773 1.96e-37 1157 1454 7 296
pectinesterase
215357 PLN02665 4.13e-36 1863 2144 75 348
pectinesterase family protein
215179 PLN02314 1.58e-35 1157 1460 280 575
pectinesterase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 2622 1 2587
0.0 1 2622 1 2587
0.0 1 2622 1 2587
0.0 1 2622 1 2562
0.0 1 2622 1 2622

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.99e-38 1168 1461 19 296
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
7.35e-38 1168 1461 19 296
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
2.22e-25 1153 1460 5 308
Pectin methylesterase from Carrot [Daucus carota]
5.88e-24 1155 1460 3 304
Chain A, Pectinesterase 1 [Solanum lycopersicum]
1.62e-15 814 1057 7 278
Chain A, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.75e-46 1149 1466 12 331
Pectinesterase OS=Aspergillus niger OX=5061 GN=pme1 PE=1 SV=1
1.10e-45 1149 1461 12 327
Pectinesterase OS=Aspergillus aculeatus OX=5053 GN=pme1 PE=2 SV=1
1.35e-38 1496 1823 29 324
Probable pectinesterase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pmeA PE=3 SV=1
3.37e-38 1496 1823 29 324
Probable pectinesterase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pmeA PE=3 SV=1
4.69e-38 1496 1823 30 325
Pectinesterase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pmeA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000226 0.999733 CS pos: 19-20. Pr: 0.9775

TMHMM  Annotations      help

There is no transmembrane helices in FPRN_12357-t42_1-p1.