CAZyme Information: FPRN_11705-t42_1-p1

Basic Information

• Species: Fusarium proliferatum
• Lineage: Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium proliferatum
• CAZyme ID: FPRN_11705-t42_1-p1
• CAZy Family: GH43|CBM6
• CAZyme Description: related to pectate lyase L precursor

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
394	FCQG01000016|CGC4	43052.56	9.9807

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_FproliferatumNRRL62905	15602	N/A	348	15254

• Gene Location: location=FCQG01000016:4156-5340(+)

Full Sequence      

MLLFKYIVAVLPTALAKDIFVAPNGSSSGSGSSSSPLADIQAAVNAASAGDTIYLRKGTY
HPSKNIHFTKKGSSRKPYTIRSYNNEEIIIGGDKMPGTPAALGASLSGKDRGIFHVERAE
YWRFIHITLTKGPYGVYVKDSHNNYFERLTTHSNYETGFHMQNSISNNEIVYLDTHNNAD
PRNNGQNADGMAIKEGSGTGNIIRGIRSYENADDGIDLYEFKSSVTILDNIIFDNGVNRG
NFNPYRGDGIGIKLGGGSPANRANVNHVARNNFSFRNRRGFSDNNMPGDMTLIHNTAWKN
REEGFNQRSSKATYENNLAANNAGSSSLSKQNTLTSVKGKGNNWEKGGSWQDADFKATST
SLIKGRRQANGKITRSDFLRPADGGNYGATTHWV

Enzyme Prediction     

No EC number prediction in FPRN_11705-t42_1-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL9	16	381	3.2e-140	0.9942363112391931

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
404168	Beta_helix	2.13e-05	134	236	24	138	Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
225954	NosD	0.007	103	279	90	308	Nitrous oxidase accessory protein NosD, contains tandem CASH domains [Inorganic ion transport and metabolism].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QGI99232.1|PL9_3	6.96e-281	1	394	1	394
QGI68339.1|PL9_3	6.96e-281	1	394	1	394
CCT72704.1|PL9_3	6.96e-281	1	394	1	394
QGI85557.1|PL9_3	6.96e-281	1	394	1	394
QKD61899.1|PL9_3	7.14e-274	1	394	1	394

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
1RU4_A	1.29e-45	20	380	18	368	Chain A, Pectate lyase [Dickeya chrysanthemi]
5OLQ_A	3.00e-22	15	306	1	324	Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLQ_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLQ_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLS_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|P0C1A7|PLYL_DICD3	1.11e-44	20	380	43	393	Pectate lyase L OS=Dickeya dadantii (strain 3937) OX=198628 GN=pelL PE=1 SV=1
sp|P0C1A6|PLYL_DICCH	8.15e-44	20	380	43	393	Pectate lyase L OS=Dickeya chrysanthemi OX=556 GN=pelL PE=3 SV=1
sp|P22751|PLYX_DICCH	2.61e-18	5	305	377	644	Pectate disaccharide-lyase OS=Dickeya chrysanthemi OX=556 GN=pelX PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000365	0.999609	CS pos: 16-17. Pr: 0.9774

TMHMM  Annotations     

There is no transmembrane helices in FPRN_11705-t42_1-p1.