CAZyme Information: FPRN_10943-t42_1-p1

Basic Information

• Species: Fusarium proliferatum
• Lineage: Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium proliferatum
• CAZyme ID: FPRN_10943-t42_1-p1
• CAZy Family: GH33
• CAZyme Description: probable alfa-L-rhamnosidase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
923	FCQG01000037|CGC1	104392.85	5.5116

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_FproliferatumNRRL62905	15602	N/A	348	15254

• Gene Location: location=FCQG01000037:17928-20749(-)

Full Sequence      

MFLQVVDVRFEHYRRPNTLGIHEHKPRISWRLSNAPPGFEQQAYELRLEKVSGQESHVVC
TSQVESSESHLVPWPAEESIASRQRYTVCIRVRGKGETSFSDWSKRAWLEAGLLNRNDWK
GKFISAPWSEKDNDKPKPEDLFRKAFTLNSGLASARLYITAQGIYEAEINGHRVGDYFLA
PGWSCYDNELTYQTYDVTDLIDSRINCLGVRLAEGWFTGRLSFDGGIRNRYGTRTSLLAQ
LELRYSDSSSHVITTDDDWMVAQGPIRLAEIYNGEKYDATVELPGWSSHEHVAGHWEGAV
VLPFISEKINLTAGYREPVRRIETLKPVSKITTPTGKTILDFGQNLVGYVCIKAVRGQRG
HEVTLKHAEVLENGELGVRPLRVCDATDVYTLRGDAEPEVYEPRFTYHGFRYVQIDNWPS
EDQDVVASLEAIVCHTDMEEQGTFTCSNDKVNQLFSNVRWSMRDNFLSIPTDCPQRDERL
GWTGDLALFAPTATYIYGCYPILRDWLKGVWFDQQRQGGVPPMVSPNILDKCRIWGPVWP
CAIWHDVVVLAPWALYEETADPAILADQFESMETWFKVIPKSKDRCTRLWDFNADQLSDW
LDPSAPPDDAAKATTDPPLVANAFLINSLDIMARVCGILGKTKDHLFYKSWADNARAEFT
QEYVSPSGRLVSDTQTAYSLAICFKLLNKDQLSRAGSRLAEIVRRNAFRIGTGFAGTPFV
CEALTLTGHSNVAYSMLLNEKCPSWLYAISMGATTTWERWDSMLPDGSINPGEMTSFNHY
AYGAIAKFMVERLAGLQRLEAGWKRSRVQPVVGGDFTWASASHLTPYGKVSSSWRIEGDD
TEKQVLRVDVEVPPSTTMEVVLPSENSAQKTEVVGPGKWSFTVDYKKQGEWPVKEIKFIL
AKIVEDFRREEELKAQASNGIET

Enzyme Prediction     

EC	3.2.1.40:1	3.2.1.40:8	3.1.1.73:2

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH78	332	862	6e-164	0.9940476190476191
CBM67	128	303	3.2e-34	0.9318181818181818

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
407469	Bac_rhamnosid6H	1.77e-129	439	793	1	340	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
400715	Bac_rhamnosid_N	2.71e-60	152	323	3	172	Alpha-L-rhamnosidase N-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. This domain is probably involved in substrate recognition.
336149	Bac_rhamnosid	9.62e-34	331	435	1	102	Bacterial alpha-L-rhamnosidase concanavalin-like domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
379972	Bac_rhamnosid_C	4.20e-21	795	878	1	76	Bacterial alpha-L-rhamnosidase C-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QGI84818.1|GH78	0.0	1	923	1	923
QGI98474.1|GH78	0.0	1	923	1	923
CCT71937.1|GH78	0.0	1	923	1	923
QGI67592.1|GH78	0.0	1	923	1	923
QKD48582.1|GH78	0.0	1	923	80	1002

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6GSZ_A	5.53e-239	3	873	2	856	Crystal structure of native alfa-L-rhamnosidase from Aspergillus terreus [Aspergillus terreus]
3W5M_A	4.68e-151	3	866	4	998	Crystal Structure of Streptomyces avermitilis alpha-L-rhamnosidase [Streptomyces avermitilis MA-4680 = NBRC 14893],3W5N_A Crystal Structure of Streptomyces avermitilis alpha-L-rhamnosidase complexed with L-rhamnose [Streptomyces avermitilis MA-4680 = NBRC 14893]
6I60_A	2.91e-116	17	863	42	899	Structure of alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12],6I60_B Structure of alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|T2KNB2|PLH20_FORAG	1.37e-163	17	867	46	883	Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22090 PE=1 SV=2
sp|Q82PP4|RHA78_STRAW	1.76e-150	3	866	4	998	Alpha-L-rhamnosidase OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) OX=227882 GN=SAVERM_828 PE=1 SV=1
sp|P9WF03|RHA78_ALTSL	4.46e-145	17	867	42	883	Alpha-L-rhamnosidase OS=Alteromonas sp. (strain LOR) OX=1537994 GN=LOR_34 PE=1 SV=1
sp|T2KPL4|PLH28_FORAG	8.36e-83	15	878	40	919	Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22170 PE=2 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
1.000057	0.000003

TMHMM  Annotations     

There is no transmembrane helices in FPRN_10943-t42_1-p1.