CAZyme Information: FPRN_06821-t42_1-p1

Basic Information

• Species: Fusarium proliferatum
• Lineage: Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium proliferatum
• CAZyme ID: FPRN_06821-t42_1-p1
• CAZy Family: GH13
• CAZyme Description: probable exopolygalacturonase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
477		53211.70	5.2901

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_FproliferatumNRRL62905	15602	N/A	348	15254

• Gene Location: location=FCQG01000002:332979-334702(-)

Full Sequence      

MRGFQNIFVLGALFLTTANAVSLPAGVPRDISEFRDKHPYAPPKHEHRKIFRIRASNNDT
DDVADEFEKGVRKANGGGTLHLAKGKTYVIGKALDLTGLEDIHIHLEGEIRFTDDVEYWQ
ENAWYHPFQKSIMFWKWGGKDIKIYGNGVIEGQGQRWWNEFESGTGSILNPDNKYYRPIL
FYAENTTNLDVSGIHLKDSPCWNNFIVSSKNIKYTDVVATALSNNGSIIPKNTDFMNTMN
TSTVRIERTWVNIDDDCFSPKPNSSDLYVNTMYCNGTHGQSMGSLGQYQGEVSNVYDVHI
ENVWMMNGDYSAARIKVWAGEKTGTGFVNNVTFKNFWVARMDYGIFLDSCYFNISSEECN
AHPSAMQITNIHFENFTGYTSGVYGNAVARLSCSAAEDAVCANITVKDFNIETPCGGQPV
IICDGMHGDIGVDCVPFDSDEAKVALTAKCTTPMVAIDTDPWGSGLIEKKKGVFHPE

Enzyme Prediction     

EC	3.2.1.67:3

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH28	71	428	5.7e-61	0.9692307692307692

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
395231	Glyco_hydro_28	8.11e-38	91	427	14	316	Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
177865	PLN02218	3.22e-24	60	412	81	409	polygalacturonase ADPG
215426	PLN02793	2.65e-23	136	417	135	400	Probable polygalacturonase
178580	PLN03003	3.45e-23	144	417	117	363	Probable polygalacturonase At3g15720
215540	PLN03010	2.67e-22	57	429	57	392	polygalacturonase

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QKD61505.1|GH28	0.0	1	477	1	477
AWW14915.1|GH28	0.0	1	477	1	477
QNQ74175.1|GH28	0.0	1	477	1	477
QNQ74174.1|GH28	0.0	1	477	1	477
UPK95511.1|GH28	0.0	1	476	1	476

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
4C2L_A	7.56e-51	57	434	26	382	Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis]
1HG8_A	8.15e-14	91	378	31	303	Endopolygalacturonase from the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides]
1RMG_A	3.68e-10	164	428	114	355	Rhamnogalacturonase A From Aspergillus Aculeatus [Aspergillus aculeatus]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|A1DAX2|PGXB_NEOFI	6.14e-147	5	434	1	431	Probable exopolygalacturonase B OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pgxB PE=3 SV=1
sp|Q873X6|PGXB_EMENI	1.60e-146	43	434	50	436	Probable exopolygalacturonase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pgxB PE=2 SV=1
sp|Q0C7H7|PGXB_ASPTN	8.82e-145	44	434	45	430	Probable exopolygalacturonase B OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pgxB PE=3 SV=1
sp|Q2TW03|PGXB_ASPOR	1.43e-143	44	434	45	430	Probable exopolygalacturonase B OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pgxB PE=3 SV=2
sp|B8NX60|PGXB_ASPFN	2.02e-143	44	434	45	430	Probable exopolygalacturonase B OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pgxB PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000319	0.999646	CS pos: 20-21. Pr: 0.9696

TMHMM  Annotations     

There is no transmembrane helices in FPRN_06821-t42_1-p1.